Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC134882.1-201ENST00000603738 1676 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 ZFRP1-201ENST00000457579 2970 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 OR51H2P-202ENST00000641424 3046 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 USP9YP4-201ENST00000424401 1745 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 RN7SKP115-201ENST00000363177 317 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 MIR525-201ENST00000384978 85 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 RNU6-1176P-201ENST00000390955 107 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC002542.1-201ENST00000440683 193 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 RPS7P5-201ENST00000441482 581 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC073264.2-201ENST00000448886 166 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC010733.1-201ENST00000451515 401 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC093166.2-201ENST00000455969 1017 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 RPS29P33-201ENST00000456717 146 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC022795.1-201ENST00000473808 480 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AL035404.1-201ENST00000497982 568 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AP006289.1-201ENST00000538089 277 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 CR383656.6-201ENST00000550518 394 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 SNORA74C-1-201ENST00000580726 201 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 MIR7703-201ENST00000620784 77 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AC007275.1-201ENST00000621243 671 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 ATE1-AS1-202ENST00000636460 506 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX30Q5VWJ9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 TLK1P1-201ENST00000456760 2440 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 MIR298-201ENST00000401212 88 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPS4XP9-201ENST00000405151 780 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPL26P29-201ENST00000415623 438 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC019050.1-201ENST00000418508 492 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 OR2B7P-201ENST00000429302 934 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC092162.1-201ENST00000432828 434 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPS17P8-201ENST00000434525 335 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPS20P1-201ENST00000434853 354 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 CEACAMP9-201ENST00000442990 513 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 YWHAQP9-201ENST00000445891 512 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL356981.1-201ENST00000454879 684 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC010326.1-201ENST00000462726 602 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RPS4XP6-201ENST00000477670 797 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC090686.1-201ENST00000481577 749 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC107918.3-201ENST00000533272 382 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC110743.1-201ENST00000584870 478 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms