Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC117434.1-201ENST00000419971 836 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC112206.1-201ENST00000468416 477 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MIR128-1-201ENST00000384921 82 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 SNORD96B-201ENST00000386148 79 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MIR1251-201ENST00000408552 70 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 HMGB1P21-201ENST00000502313 581 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 MIR3922-201ENST00000585192 84 ntBASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13DQ5THJ4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 CBX1P3-201ENST00000413296 527 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RPL36AP10-201ENST00000421785 322 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 SKP1P3-201ENST00000429280 487 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 Z75741.1-201ENST00000446793 314 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AL591363.1-201ENST00000450091 483 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 CYCSP30-201ENST00000546447 172 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC005476.1-201ENST00000554427 397 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC022968.1-201ENST00000567372 442 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC010653.1-201ENST00000571108 881 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 MIR4672-201ENST00000583126 81 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC005261.6-201ENST00000623072 1387 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RBMY1KP-201ENST00000423480 476 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC104662.1-201ENST00000604448 511 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AL139095.1-201ENST00000404326 391 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 MIR1271-201ENST00000408537 86 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 VN1R51P-201ENST00000411675 945 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC073063.1-201ENST00000434352 607 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AP005205.1-201ENST00000563503 508 ntBASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13DQ5THJ4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 RNU2-65P-201ENST00000410162 185 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AP001486.1-201ENST00000463339 476 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 RPL21P13-201ENST00000488305 481 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 RN7SKP57-201ENST00000517248 293 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AC138832.1-201ENST00000522871 556 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 MIR3936-201ENST00000584304 110 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 AC026368.1-201ENST00000614934 690 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.59□□□□□ -1.99
VPS13DQ5THJ4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms