Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
COL16A1Q07092 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.33□□□□□ -1.56
COL16A1Q07092 RPL7P44-201ENST00000424827 742 ntBASIC5.33□□□□□ -1.56
COL16A1Q07092 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.33□□□□□ -1.56
COL16A1Q07092 Z74696.2-201ENST00000436514 498 ntBASIC5.33□□□□□ -1.56
COL16A1Q07092 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 RN7SL807P-201ENST00000470923 297 ntBASIC5.33□□□□□ -1.56
COL16A1Q07092 RPL7P23-201ENST00000493874 747 ntBASIC5.33□□□□□ -1.56
COL16A1Q07092 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
COL16A1Q07092 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.33□□□□□ -1.56
COL16A1Q07092 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.33□□□□□ -1.56
COL16A1Q07092 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.33□□□□□ -1.56
COL16A1Q07092 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 AL356274.2-201ENST00000624379 3752 ntBASIC5.33□□□□□ -1.56
COL16A1Q07092 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
COL16A1Q07092 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL16A1Q07092 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.33□□□□□ -1.56
COL16A1Q07092 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.32□□□□□ -1.56
COL16A1Q07092 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.32□□□□□ -1.56
COL16A1Q07092 DPPA3P2-201ENST00000553589 478 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 AC025627.2-201ENST00000576220 160 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 MIR4660-201ENST00000583549 74 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.32□□□□□ -1.56
COL16A1Q07092 AC119674.1-207ENST00000641355 633 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL16A1Q07092 AL669831.5-218ENST00000591702 1873 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL16A1Q07092 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL16A1Q07092 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 MARK2P15-201ENST00000432204 2186 ntBASIC5.32□□□□□ -1.56
COL16A1Q07092 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.32□□□□□ -1.56
COL16A1Q07092 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL16A1Q07092 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL16A1Q07092 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL16A1Q07092 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
COL16A1Q07092 AC104623.2-202ENST00000623477 4002 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
COL16A1Q07092 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 AC010740.1-201ENST00000417035 684 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 RPL12P46-201ENST00000436610 195 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 APOOP2-201ENST00000461561 539 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.31□□□□□ -1.56
COL16A1Q07092 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.31□□□□□ -1.56
COL16A1Q07092 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.31□□□□□ -1.56
COL16A1Q07092 AC026368.1-201ENST00000614934 690 ntBASIC5.31□□□□□ -1.56
COL16A1Q07092 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL16A1Q07092 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
COL16A1Q07092 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL16A1Q07092 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC234772.1-201ENST00000377927 937 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL16A1Q07092 RN7SKP284-201ENST00000411002 343 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 AC017083.1-201ENST00000428093 483 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 AL831737.1-201ENST00000441288 271 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 AC026784.1-201ENST00000507986 352 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC010653.1-201ENST00000571108 881 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
COL16A1Q07092 MTCO3P22-201ENST00000603219 784 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 AC010300.1-201ENST00000600671 5134 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL16A1Q07092 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL16A1Q07092 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC083843.3-201ENST00000623679 2186 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
COL16A1Q07092 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
COL16A1Q07092 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL16A1Q07092 SNORA5.1-201ENST00000384275 131 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC025518.1-201ENST00000479856 347 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
COL16A1Q07092 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.3□□□□□ -1.56
COL16A1Q07092 AC069306.1-201ENST00000507006 843 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 SNORA70.17-201ENST00000516449 133 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 RNU7-143P-201ENST00000516781 65 ntBASIC5.3□□□□□ -1.56
COL16A1Q07092 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL16A1Q07092 AC233263.6-201ENST00000631132 1963 ntBASIC5.29□□□□□ -1.56
COL16A1Q07092 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms