Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LRRC34P2-201ENST00000514850 553 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.72□□□□□ -1.49
YBX1P67809 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.72□□□□□ -1.49
YBX1P67809 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 AC126615.2-201ENST00000553003 515 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 AL391840.1-201ENST00000571144 367 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC008752.3-201ENST00000588113 712 ntBASIC5.72□□□□□ -1.49
YBX1P67809 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 AL592295.2-201ENST00000612578 206 ntBASIC5.72□□□□□ -1.49
YBX1P67809 OR8G7P-201ENST00000616658 848 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC245014.3-201ENST00000618589 347 ntBASIC5.72□□□□□ -1.49
YBX1P67809 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 U6.107-201ENST00000637108 79 ntBASIC5.72□□□□□ -1.49
YBX1P67809 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 AL022578.1-201ENST00000439330 1433 ntBASIC5.72□□□□□ -1.49
YBX1P67809 AC004076.2-201ENST00000620532 3323 ntBASIC5.72□□□□□ -1.49
YBX1P67809 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
YBX1P67809 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.72□□□□□ -1.49
YBX1P67809 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
YBX1P67809 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
YBX1P67809 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.71□□□□□ -1.49
YBX1P67809 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
YBX1P67809 PARP4P2-201ENST00000446672 3326 ntBASIC5.71□□□□□ -1.49
YBX1P67809 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.71□□□□□ -1.49
YBX1P67809 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.71□□□□□ -1.49
YBX1P67809 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
YBX1P67809 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 RNU5F-6P-201ENST00000362979 116 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RNU6-1339P-201ENST00000363574 91 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RNU6-1090P-201ENST00000364065 94 ntBASIC5.71□□□□□ -1.5
YBX1P67809 Y_RNA.263-201ENST00000364659 114 ntBASIC5.71□□□□□ -1.5
YBX1P67809 Y_RNA.295-201ENST00000364918 102 ntBASIC5.71□□□□□ -1.5
YBX1P67809 MTCO3P40-201ENST00000392516 676 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL161909.1-201ENST00000397390 712 ntBASIC5.71□□□□□ -1.5
YBX1P67809 MIR1284-201ENST00000408337 120 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RNU6-77P-201ENST00000410554 91 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RNU6-248P-201ENST00000410720 107 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RPS20P15-201ENST00000412792 311 ntBASIC5.71□□□□□ -1.5
YBX1P67809 EEF1A1P40-201ENST00000412883 573 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RPS21P8-201ENST00000413365 247 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 BX284632.2-201ENST00000421091 399 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL513174.1-201ENST00000423182 629 ntBASIC5.71□□□□□ -1.5
YBX1P67809 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AL512649.1-201ENST00000428997 581 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.71□□□□□ -1.5
YBX1P67809 AL512605.1-202ENST00000441919 381 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AL359955.2-201ENST00000445380 353 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AC074386.1-201ENST00000476560 767 ntBASIC5.71□□□□□ -1.5
YBX1P67809 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 AC114786.4-201ENST00000508771 728 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 MTCYBP43-201ENST00000513621 740 ntBASIC5.71□□□□□ -1.5
YBX1P67809 RNU6-416P-201ENST00000516265 103 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC027308.1-201ENST00000517993 110 ntBASIC5.71□□□□□ -1.5
YBX1P67809 IGJP1-201ENST00000522682 475 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.71□□□□□ -1.5
YBX1P67809 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 OR6C73P-201ENST00000546432 358 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.71□□□□□ -1.5
YBX1P67809 TXNP4-201ENST00000575018 310 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.71□□□□□ -1.5
YBX1P67809 MIR4776-2-201ENST00000580204 80 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AP001004.1-201ENST00000582468 324 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC090236.2-201ENST00000587933 1101 ntBASIC5.71□□□□□ -1.5
YBX1P67809 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
YBX1P67809 RPL12P48-201ENST00000605620 304 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AC055876.5-201ENST00000605667 259 ntBASIC5.71□□□□□ -1.5
YBX1P67809 AL445222.1-201ENST00000607259 628 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms