Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC109462.1-201ENST00000491087 368 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AC091868.1-201ENST00000508746 304 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AC109458.1-201ENST00000508858 316 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 RN7SKP147-201ENST00000517154 244 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AC090151.1-201ENST00000520784 730 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.08□□□□□ -1.92
CKS1BP61024 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CKS1BP61024 AL845331.3-202ENST00000562856 261 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 AL391358.1-201ENST00000605342 190 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CKS1BP61024 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC004808.2-201ENST00000627965 773 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 AC021755.1-201ENST00000559747 1447 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CKS1BP61024 RIOK3P1-201ENST00000418778 1528 ntBASIC3.08□□□□□ -1.92
CKS1BP61024 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CKS1BP61024 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CKS1BP61024 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 RPL23P2-201ENST00000320371 421 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CKS1BP61024 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 AL034374.1-201ENST00000406329 351 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 P2RY10P2-201ENST00000416730 913 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC062016.2-201ENST00000420950 676 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 GLUD1P9-201ENST00000420997 1173 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 ELOCP6-201ENST00000429066 328 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 ACTR3P2-201ENST00000439585 1257 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 RPS7P5-201ENST00000441482 581 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC112498.1-201ENST00000444401 332 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 RPS27AP15-201ENST00000447672 466 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 OR1H1P-201ENST00000448731 937 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 ELOCP12-201ENST00000458706 328 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 snoU13.20-201ENST00000459180 104 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.07□□□□□ -1.92
CKS1BP61024 RN7SL174P-201ENST00000475578 289 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.07□□□□□ -1.92
CKS1BP61024 RPL7L1P4-201ENST00000513004 707 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC010265.1-201ENST00000513509 211 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC013701.1-201ENST00000522657 465 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.07□□□□□ -1.92
CKS1BP61024 AC209154.1-201ENST00000582156 337 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 ADAD1P2-201ENST00000588476 646 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CKS1BP61024 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 AP000864.1-201ENST00000609424 650 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AL450489.1-201ENST00000612071 468 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AL353726.1-201ENST00000614041 1000 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC145207.9-201ENST00000623802 325 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 AC048347.1-201ENST00000624621 427 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.07□□□□□ -1.92
CKS1BP61024 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 AL391684.1-202ENST00000641293 1636 ntBASIC3.07□□□□□ -1.92
CKS1BP61024 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CKS1BP61024 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 RNA5SP388-201ENST00000362584 119 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 U3.25-201ENST00000391209 220 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 U3.30-201ENST00000391308 210 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 RPL30P2-201ENST00000414021 291 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 AC096644.3-201ENST00000416788 338 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 UBTFL3-201ENST00000418934 1024 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC093162.1-201ENST00000419682 124 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 RPL21P109-201ENST00000422213 475 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 USP12PY-201ENST00000427677 1064 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms