Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.58□□□□□ -1.84
SPCS3P61009 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.58□□□□□ -1.84
SPCS3P61009 AC019131.2-201ENST00000609071 870 ntBASIC3.58□□□□□ -1.84
SPCS3P61009 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPCS3P61009 LINC01808-202ENST00000641680 1116 ntBASIC3.58□□□□□ -1.84
SPCS3P61009 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.58□□□□□ -1.84
SPCS3P61009 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
SPCS3P61009 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.58□□□□□ -1.84
SPCS3P61009 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SPCS3P61009 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPCS3P61009 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.58□□□□□ -1.84
SPCS3P61009 AF127577.6-201ENST00000623352 2191 ntBASIC3.58□□□□□ -1.84
SPCS3P61009 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.58□□□□□ -1.84
SPCS3P61009 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SPCS3P61009 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.57□□□□□ -1.84
SPCS3P61009 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 RN7SKP100-201ENST00000411258 284 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC007390.1-201ENST00000415722 356 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 COX6B1P1-201ENST00000415962 213 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC079355.1-201ENST00000421770 223 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 AC005154.2-201ENST00000438110 379 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 CACYBPP1-201ENST00000438592 684 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 RPL12P11-201ENST00000439970 501 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 AP000893.1-201ENST00000474462 794 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC108471.1-201ENST00000513977 287 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC022790.1-201ENST00000522872 204 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 AC005000.1-201ENST00000536192 288 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 MIR4489-201ENST00000578869 62 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.57□□□□□ -1.84
SPCS3P61009 MIR3667-201ENST00000581025 74 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SPCS3P61009 AL133338.2-201ENST00000604292 736 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AL160290.3-201ENST00000604869 165 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC092653.1-201ENST00000608509 531 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.57□□□□□ -1.84
SPCS3P61009 AL031666.3-201ENST00000609320 1006 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPCS3P61009 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.57□□□□□ -1.84
SPCS3P61009 MIR6853-201ENST00000619642 74 ntBASIC3.57□□□□□ -1.84
SPCS3P61009 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SPCS3P61009 PRO1804-201ENST00000623780 2050 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.56□□□□□ -1.84
SPCS3P61009 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SPCS3P61009 GABPAP-201ENST00000419271 1356 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 AC021146.4-201ENST00000309229 279 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 RNA5SP191-201ENST00000362585 102 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.56□□□□□ -1.84
SPCS3P61009 MTCO3P31-201ENST00000405526 789 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 RPL31P52-201ENST00000407532 367 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 ARAFP1-201ENST00000422172 605 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 RBMY1KP-201ENST00000423480 476 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.56□□□□□ -1.84
SPCS3P61009 AL049745.1-201ENST00000433953 286 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.56□□□□□ -1.84
SPCS3P61009 AL138799.3-201ENST00000438968 350 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 HMGB3P8-201ENST00000449709 577 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 ABCF2P2-201ENST00000450549 296 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 CALM1P2-201ENST00000452941 448 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.56□□□□□ -1.84
SPCS3P61009 AC079804.1-201ENST00000461922 436 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SPCS3P61009 RPL7P16-201ENST00000479738 738 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
SPCS3P61009 AC147055.3-201ENST00000510547 851 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.56□□□□□ -1.84
SPCS3P61009 MTCO1P30-201ENST00000515244 580 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 NARSP2-201ENST00000518524 679 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.56□□□□□ -1.84
SPCS3P61009 AC009117.1-201ENST00000563948 554 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.56□□□□□ -1.84
SPCS3P61009 AC007620.3-201ENST00000608131 497 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.56□□□□□ -1.84
SPCS3P61009 MIR8058-201ENST00000615737 89 ntBASIC3.56□□□□□ -1.84
SPCS3P61009 AL589935.2-201ENST00000616471 1231 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms