Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 B3GNT2P1-201ENST00000434960 952 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 GAPDHP48-201ENST00000436626 961 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC004865.1-201ENST00000442276 1003 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.05□□□□□ -1.6
CLRN1P58418 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 RPL18AP17-201ENST00000455326 198 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 NXT1P1-201ENST00000458481 316 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC009120.1-201ENST00000493458 473 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC239860.2-201ENST00000525886 270 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC137627.1-201ENST00000545761 289 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.05□□□□□ -1.6
CLRN1P58418 AC136619.2-201ENST00000563361 631 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC087481.2-201ENST00000565492 330 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 KPNA2P3-201ENST00000584190 848 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 MIR548AB-201ENST00000584917 84 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 AC018809.2-201ENST00000602436 3823 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC015871.2-201ENST00000603605 948 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC093765.1-201ENST00000603758 881 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC107214.2-201ENST00000608204 634 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC138932.5-201ENST00000617759 563 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 AC022400.9-201ENST00000623633 273 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 CDRT1-208ENST00000630868 794 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLRN1P58418 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLRN1P58418 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 RBPJP2-201ENST00000618187 1444 ntBASIC5.05□□□□□ -1.6
CLRN1P58418 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLRN1P58418 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLRN1P58418 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 RNU1-150P-201ENST00000362491 162 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 Y_RNA.25-201ENST00000362528 102 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 RNU6-1042P-201ENST00000384204 107 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 RNU6-1151P-201ENST00000384684 107 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 OR7E101P-201ENST00000400428 513 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 RNU2-18P-201ENST00000411224 162 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC096921.1-201ENST00000411661 375 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.04□□□□□ -1.6
CLRN1P58418 HMGB3P24-201ENST00000433260 622 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 AP000936.3-201ENST00000438127 255 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.04□□□□□ -1.6
CLRN1P58418 AL161722.1-201ENST00000446972 1032 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 NPM1P39-201ENST00000449818 867 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC108463.1-201ENST00000450258 347 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AP006222.1-205ENST00000450734 457 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 NDUFA5P7-201ENST00000452914 242 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLRN1P58418 NF1P3-201ENST00000457709 450 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CLRN1P58418 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLRN1P58418 AC116347.2-201ENST00000514912 523 ntBASIC5.04□□□□□ -1.6
CLRN1P58418 RNA5SP271-201ENST00000516700 88 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 215.2 ms