Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN6P56747 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 RNA5SP124-201ENST00000362739 110 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 MIR3065-201ENST00000390137 79 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN6P56747 RN7SKP235-201ENST00000410662 305 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 RPS3AP25-201ENST00000411660 793 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 MTCYBP7-201ENST00000419540 1134 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 RPL21P43-201ENST00000425440 472 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN6P56747 MRPL50P1-201ENST00000431951 384 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 AC079804.1-201ENST00000461922 436 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 RPL23AP2-201ENST00000471227 466 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 AP000926.3-201ENST00000497201 299 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN6P56747 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN6P56747 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN6P56747 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN6P56747 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 AC015912.2-201ENST00000571053 181 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN6P56747 RNU4-89P-201ENST00000607443 133 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 AC019131.2-201ENST00000609071 870 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 NF1P10-201ENST00000613227 742 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN6P56747 MIR6075-201ENST00000620782 95 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 CR392039.5-201ENST00000623201 510 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CLDN6P56747 MAPK10-349ENST00000641767 3661 ntBASIC4.16□□□□□ -1.74
CLDN6P56747 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN6P56747 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN6P56747 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN6P56747 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN6P56747 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.15□□□□□ -1.74
CLDN6P56747 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.15□□□□□ -1.74
CLDN6P56747 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CLDN6P56747 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN6P56747 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
CLDN6P56747 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CLDN6P56747 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CLDN6P56747 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN6P56747 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CLDN6P56747 SNORD46.1-201ENST00000364139 104 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AL034403.1-201ENST00000399414 885 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AC093578.1-201ENST00000415219 368 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC069157.1-201ENST00000421749 137 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 RPL37P1-201ENST00000432310 284 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 PPIAP13-201ENST00000434706 478 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 TMX2P1-201ENST00000436507 708 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 RRM2P4-201ENST00000441721 562 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC104651.2-201ENST00000447549 528 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN6P56747 LARP7P4-201ENST00000481075 878 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 RPS4XP18-201ENST00000495480 763 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AK4P6-201ENST00000505168 528 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AC010460.1-201ENST00000507087 466 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AC026726.1-201ENST00000512859 601 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 RNA5SP497-201ENST00000516081 97 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN6P56747 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC017100.2-201ENST00000584628 355 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.15□□□□□ -1.75
CLDN6P56747 AC069200.1-201ENST00000609511 323 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN6P56747 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN6P56747 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN6P56747 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLDN6P56747 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN6P56747 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN6P56747 AC125257.1-201ENST00000560400 2930 ntBASIC4.15□□□□□ -1.75
CLDN6P56747 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLDN6P56747 DDX18P4-201ENST00000511690 1966 ntBASIC4.14□□□□□ -1.75
CLDN6P56747 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN6P56747 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN6P56747 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN6P56747 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CLDN6P56747 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.14□□□□□ -1.75
CLDN6P56747 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN6P56747 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
CLDN6P56747 SNORD96B-201ENST00000386148 79 ntBASIC4.14□□□□□ -1.75
CLDN6P56747 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLDN6P56747 AL157831.1-201ENST00000426134 473 ntBASIC4.14□□□□□ -1.75
CLDN6P56747 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms