Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCS2P54868 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCS2P54868 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCS2P54868 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCS2P54868 AC027176.2-201ENST00000559166 746 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCS2P54868 AC005255.1-201ENST00000593748 216 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 AC112230.1-201ENST00000604342 547 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 AL354798.1-201ENST00000622505 329 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 AC019278.1-201ENST00000623516 479 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 AC004777.1-201ENST00000624317 287 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCS2P54868 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCS2P54868 OR5BE1P-202ENST00000641168 1176 ntBASIC4.79□□□□□ -1.64
HMGCS2P54868 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCS2P54868 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCS2P54868 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HMGCS2P54868 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCS2P54868 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCS2P54868 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCS2P54868 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
HMGCS2P54868 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGCS2P54868 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 RAB9AP5-201ENST00000437794 597 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGCS2P54868 RAB9AP2-201ENST00000443911 597 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AC107015.1-201ENST00000466902 747 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 TRMT10BP1-201ENST00000519377 943 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC011270.1-201ENST00000558606 583 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGCS2P54868 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AL592436.1-201ENST00000605135 558 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AC100814.1-201ENST00000606963 623 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 AL121772.2-201ENST00000614331 297 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
HMGCS2P54868 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HMGCS2P54868 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
HMGCS2P54868 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGCS2P54868 AC097461.1-201ENST00000568928 2821 ntBASIC4.78□□□□□ -1.65
HMGCS2P54868 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS2P54868 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS2P54868 AC107021.2-201ENST00000567714 2095 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS2P54868 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS2P54868 RNU6-1331P-201ENST00000363658 106 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 RNU6-213P-201ENST00000384051 104 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 SNORD96B-201ENST00000386148 79 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMGCS2P54868 CTSL3P-202ENST00000412179 788 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC096644.3-201ENST00000416788 338 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AL121878.1-201ENST00000418638 859 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 SETP10-201ENST00000424368 814 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 RPL12P18-201ENST00000437175 325 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AL031584.1-201ENST00000447169 754 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 RPL7P1-201ENST00000468161 747 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 RPL7P9-201ENST00000468715 747 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 RPL7L1P8-201ENST00000469911 741 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS2P54868 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 CYCSP28-201ENST00000534284 321 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS2P54868 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 MIR5684-201ENST00000585074 65 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS2P54868 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS2P54868 MIR6868-201ENST00000611215 58 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AL353726.1-201ENST00000614041 1000 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HMGCS2P54868 AC005086.4-201ENST00000623065 213 ntBASIC4.77□□□□□ -1.65
HMGCS2P54868 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS2P54868 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS2P54868 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGCS2P54868 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS2P54868 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HMGCS2P54868 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS2P54868 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS2P54868 RNU4-23P-201ENST00000362839 140 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 RNU6-1263P-201ENST00000384601 106 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 NPM1P10-201ENST00000398310 865 ntBASIC4.76□□□□□ -1.65
HMGCS2P54868 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms