Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AC006499.6-201ENST00000511169 607 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AC105233.3-201ENST00000531125 744 ntBASIC4.56□□□□□ -1.68
CASP4P49662 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.56□□□□□ -1.68
CASP4P49662 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.56□□□□□ -1.68
CASP4P49662 AC063950.1-201ENST00000552036 308 ntBASIC4.56□□□□□ -1.68
CASP4P49662 GLRXP2-201ENST00000555594 321 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.56□□□□□ -1.68
CASP4P49662 AC022655.2-201ENST00000577280 318 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.56□□□□□ -1.68
CASP4P49662 AC005962.2-201ENST00000611427 652 ntBASIC4.56□□□□□ -1.68
CASP4P49662 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.56□□□□□ -1.68
CASP4P49662 AL391597.1-201ENST00000618707 694 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AL445567.2-201ENST00000618935 498 ntBASIC4.56□□□□□ -1.68
CASP4P49662 AC010435.1-201ENST00000623353 1177 ntBASIC4.56□□□□□ -1.68
CASP4P49662 MIR3653-201ENST00000625572 110 ntBASIC4.56□□□□□ -1.68
CASP4P49662 OR52H1-202ENST00000641796 1061 ntBASIC4.56□□□□□ -1.68
CASP4P49662 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASP4P49662 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CASP4P49662 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASP4P49662 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CASP4P49662 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASP4P49662 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CASP4P49662 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.56□□□□□ -1.68
CASP4P49662 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CASP4P49662 LARP1BP1-201ENST00000506036 1359 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC087190.4-201ENST00000574616 8334 ntBASIC4.55□□□□□ -1.68
CASP4P49662 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
CASP4P49662 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 MIR383-201ENST00000362257 73 ntBASIC4.55□□□□□ -1.68
CASP4P49662 RNU6-618P-201ENST00000363518 112 ntBASIC4.55□□□□□ -1.68
CASP4P49662 MIR513A2-201ENST00000385249 127 ntBASIC4.55□□□□□ -1.68
CASP4P49662 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 AC240504.1-201ENST00000395709 845 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AL607077.1-201ENST00000401718 499 ntBASIC4.55□□□□□ -1.68
CASP4P49662 ST13P16-201ENST00000401760 781 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AP000357.1-201ENST00000409926 1165 ntBASIC4.55□□□□□ -1.68
CASP4P49662 RN7SKP182-201ENST00000410772 298 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.55□□□□□ -1.68
CASP4P49662 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.55□□□□□ -1.68
CASP4P49662 EIF4EP1-201ENST00000422311 642 ntBASIC4.55□□□□□ -1.68
CASP4P49662 COX6B1P7-201ENST00000430845 235 ntBASIC4.55□□□□□ -1.68
CASP4P49662 MTCO1P45-201ENST00000431457 267 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.55□□□□□ -1.68
CASP4P49662 UQCRHP4-201ENST00000471686 272 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC025554.1-201ENST00000505641 188 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.55□□□□□ -1.68
CASP4P49662 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 PARP4P3-201ENST00000510265 317 ntBASIC4.55□□□□□ -1.68
CASP4P49662 KRT19P6-201ENST00000510983 209 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.55□□□□□ -1.68
CASP4P49662 AC099522.1-202ENST00000514718 367 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.55□□□□□ -1.68
CASP4P49662 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.55□□□□□ -1.68
CASP4P49662 MIR3939-201ENST00000582614 106 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC011477.5-201ENST00000586571 259 ntBASIC4.55□□□□□ -1.68
CASP4P49662 ELOCP28-201ENST00000590044 317 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC084373.1-201ENST00000603311 235 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC034236.3-201ENST00000605999 461 ntBASIC4.55□□□□□ -1.68
CASP4P49662 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 AC008785.1-201ENST00000624475 456 ntBASIC4.55□□□□□ -1.68
CASP4P49662 BMS1P21-201ENST00000634565 365 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AL596275.2-204ENST00000641628 552 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AL596275.2-206ENST00000641957 626 ntBASIC4.55□□□□□ -1.68
CASP4P49662 AC091046.3-201ENST00000631455 1574 ntBASIC4.55□□□□□ -1.68
CASP4P49662 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CASP4P49662 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.55□□□□□ -1.68
CASP4P49662 AC006971.1-201ENST00000407916 4486 ntBASIC4.55□□□□□ -1.68
CASP4P49662 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.55□□□□□ -1.68
CASP4P49662 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CASP4P49662 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.54□□□□□ -1.68
CASP4P49662 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CASP4P49662 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 RNA5SP388-201ENST00000362584 119 ntBASIC4.54□□□□□ -1.68
CASP4P49662 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
CASP4P49662 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 OR6C69P-201ENST00000394268 893 ntBASIC4.54□□□□□ -1.68
CASP4P49662 ATP5F1P2-201ENST00000398143 760 ntBASIC4.54□□□□□ -1.68
CASP4P49662 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 NCSTNP1-201ENST00000406229 144 ntBASIC4.54□□□□□ -1.68
CASP4P49662 BTF3P10-201ENST00000433415 495 ntBASIC4.54□□□□□ -1.68
CASP4P49662 UBE2V2P3-201ENST00000433562 437 ntBASIC4.54□□□□□ -1.68
CASP4P49662 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.54□□□□□ -1.68
CASP4P49662 AC093716.1-201ENST00000435923 377 ntBASIC4.54□□□□□ -1.68
CASP4P49662 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 AL357520.1-201ENST00000441557 453 ntBASIC4.54□□□□□ -1.68
CASP4P49662 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CASP4P49662 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 RAD1P2-201ENST00000446414 663 ntBASIC4.54□□□□□ -1.68
CASP4P49662 CALM1P2-201ENST00000452941 448 ntBASIC4.54□□□□□ -1.68
CASP4P49662 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 AC022795.1-201ENST00000473808 480 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms