Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 AC107016.1-201ENST00000550463 337 ntBASIC3.76□□□□□ -1.81
SRP9P49458 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 AGGF1P8-201ENST00000562979 1000 ntBASIC3.76□□□□□ -1.81
SRP9P49458 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.76□□□□□ -1.81
SRP9P49458 MIR5096-201ENST00000583713 70 ntBASIC3.76□□□□□ -1.81
SRP9P49458 AL136295.6-201ENST00000610486 658 ntBASIC3.76□□□□□ -1.81
SRP9P49458 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.76□□□□□ -1.81
SRP9P49458 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SRP9P49458 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SRP9P49458 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRP9P49458 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.75□□□□□ -1.81
SRP9P49458 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.75□□□□□ -1.81
SRP9P49458 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 OR5P1P-201ENST00000299512 925 ntBASIC3.75□□□□□ -1.81
SRP9P49458 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 IGKV7-3-201ENST00000357453 298 ntBASIC3.75□□□□□ -1.81
SRP9P49458 RNA5SP447-201ENST00000363749 119 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 SNORD66.1-201ENST00000391230 76 ntBASIC3.75□□□□□ -1.81
SRP9P49458 TMSB10P2-201ENST00000416049 131 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 RPS27AP7-201ENST00000422792 455 ntBASIC3.75□□□□□ -1.81
SRP9P49458 PPIAP17-201ENST00000438507 471 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC114495.1-201ENST00000441274 436 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 PHBP16-201ENST00000446318 950 ntBASIC3.75□□□□□ -1.81
SRP9P49458 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.75□□□□□ -1.81
SRP9P49458 MTND2P25-201ENST00000449028 610 ntBASIC3.75□□□□□ -1.81
SRP9P49458 NIPA2P2-201ENST00000496376 1083 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC108145.1-201ENST00000503770 153 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC093840.1-201ENST00000511599 336 ntBASIC3.75□□□□□ -1.81
SRP9P49458 SNORA70.14-201ENST00000516205 110 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.75□□□□□ -1.81
SRP9P49458 AL360157.1-201ENST00000565962 87 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.75□□□□□ -1.81
SRP9P49458 AC020914.4-201ENST00000597690 277 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC123786.2-201ENST00000603459 275 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC079587.1-201ENST00000603846 277 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AL356218.2-201ENST00000605264 187 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC116447.1-201ENST00000613153 453 ntBASIC3.75□□□□□ -1.81
SRP9P49458 uc_338.13-201ENST00000618243 179 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC138907.10-201ENST00000623708 983 ntBASIC3.75□□□□□ -1.81
SRP9P49458 AC008785.1-201ENST00000624475 456 ntBASIC3.75□□□□□ -1.81
SRP9P49458 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRP9P49458 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SRP9P49458 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.74□□□□□ -1.81
SRP9P49458 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SRP9P49458 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SRP9P49458 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.74□□□□□ -1.81
SRP9P49458 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SRP9P49458 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SRP9P49458 RNU6-603P-201ENST00000411403 107 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.74□□□□□ -1.81
SRP9P49458 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.74□□□□□ -1.81
SRP9P49458 EIF1P3-201ENST00000423841 334 ntBASIC3.74□□□□□ -1.81
SRP9P49458 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.74□□□□□ -1.81
SRP9P49458 UBE2V1P3-201ENST00000439651 417 ntBASIC3.74□□□□□ -1.81
SRP9P49458 MTCO1P14-201ENST00000441695 1559 ntBASIC3.74□□□□□ -1.81
SRP9P49458 HMGB1P16-201ENST00000447155 540 ntBASIC3.74□□□□□ -1.81
SRP9P49458 RPL23AP24-201ENST00000458203 385 ntBASIC3.74□□□□□ -1.81
SRP9P49458 PPIAP21-201ENST00000464473 501 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AC013356.1-201ENST00000489027 564 ntBASIC3.74□□□□□ -1.81
SRP9P49458 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.74□□□□□ -1.81
SRP9P49458 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.74□□□□□ -1.81
SRP9P49458 USP9YP5-201ENST00000511770 630 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.74□□□□□ -1.81
SRP9P49458 RAB9BP1-201ENST00000519581 626 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.74□□□□□ -1.81
SRP9P49458 AC009643.1-201ENST00000532030 391 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SRP9P49458 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.74□□□□□ -1.81
SRP9P49458 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.74□□□□□ -1.81
SRP9P49458 AL109741.3-201ENST00000561748 592 ntBASIC3.74□□□□□ -1.81
SRP9P49458 MIR4284-201ENST00000578924 81 ntBASIC3.74□□□□□ -1.81
SRP9P49458 HMGB1P50-201ENST00000605814 607 ntBASIC3.74□□□□□ -1.81
SRP9P49458 AC025175.1-201ENST00000606482 759 ntBASIC3.74□□□□□ -1.81
SRP9P49458 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SRP9P49458 AL713922.2-201ENST00000619384 716 ntBASIC3.74□□□□□ -1.81
SRP9P49458 MIR7641-1-201ENST00000627518 61 ntBASIC3.74□□□□□ -1.81
SRP9P49458 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.74□□□□□ -1.81
SRP9P49458 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SRP9P49458 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SRP9P49458 AC083899.2-201ENST00000423285 1376 ntBASIC3.74□□□□□ -1.81
SRP9P49458 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
SRP9P49458 AC027287.1-201ENST00000553115 1453 ntBASIC3.73□□□□□ -1.81
SRP9P49458 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SRP9P49458 FAM35DP-201ENST00000323387 2712 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms