Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.71□□□□□ -1.66
SSR1P43307 BPIFA4P-203ENST00000603168 689 ntBASIC4.71□□□□□ -1.66
SSR1P43307 AL160290.3-201ENST00000604869 165 ntBASIC4.71□□□□□ -1.66
SSR1P43307 FAM25E-202ENST00000608562 189 ntBASIC4.71□□□□□ -1.66
SSR1P43307 AL138721.1-201ENST00000616756 179 ntBASIC4.71□□□□□ -1.66
SSR1P43307 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.71□□□□□ -1.66
SSR1P43307 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.71□□□□□ -1.66
SSR1P43307 OR2L1P-202ENST00000641567 1023 ntBASIC4.71□□□□□ -1.66
SSR1P43307 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSR1P43307 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.71□□□□□ -1.66
SSR1P43307 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SSR1P43307 SYT14P1-202ENST00000600441 1448 ntBASIC4.71□□□□□ -1.66
SSR1P43307 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSR1P43307 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.7□□□□□ -1.66
SSR1P43307 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSR1P43307 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSR1P43307 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
SSR1P43307 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSR1P43307 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSR1P43307 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 MIR124-3-201ENST00000384866 87 ntBASIC4.7□□□□□ -1.66
SSR1P43307 MIR550A3-201ENST00000390735 95 ntBASIC4.7□□□□□ -1.66
SSR1P43307 RAD23BP1-201ENST00000421404 1227 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AC093084.1-201ENST00000424233 687 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AL360081.1-201ENST00000428299 555 ntBASIC4.7□□□□□ -1.66
SSR1P43307 MTCO3P21-201ENST00000430791 643 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SSR1P43307 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 AC007537.2-201ENST00000472093 511 ntBASIC4.7□□□□□ -1.66
SSR1P43307 RN7SL826P-201ENST00000479724 288 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AC090013.1-201ENST00000485147 480 ntBASIC4.7□□□□□ -1.66
SSR1P43307 RPL7P47-201ENST00000497299 556 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.7□□□□□ -1.66
SSR1P43307 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 AC008147.3-201ENST00000548666 354 ntBASIC4.7□□□□□ -1.66
SSR1P43307 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.7□□□□□ -1.66
SSR1P43307 RPL7P50-201ENST00000600588 727 ntBASIC4.7□□□□□ -1.66
SSR1P43307 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.7□□□□□ -1.66
SSR1P43307 AC091953.3-201ENST00000623220 236 ntBASIC4.7□□□□□ -1.66
SSR1P43307 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSR1P43307 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.7□□□□□ -1.66
SSR1P43307 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.69□□□□□ -1.66
SSR1P43307 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 AC138393.1-206ENST00000540997 1886 ntBASIC4.69□□□□□ -1.66
SSR1P43307 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 RNU6-328P-201ENST00000390887 106 ntBASIC4.69□□□□□ -1.66
SSR1P43307 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 AC062016.2-201ENST00000420950 676 ntBASIC4.69□□□□□ -1.66
SSR1P43307 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.69□□□□□ -1.66
SSR1P43307 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.69□□□□□ -1.66
SSR1P43307 VN1R32P-201ENST00000452234 905 ntBASIC4.69□□□□□ -1.66
SSR1P43307 DDX39BP2-208ENST00000453923 258 ntBASIC4.69□□□□□ -1.66
SSR1P43307 C1DP3-201ENST00000455013 423 ntBASIC4.69□□□□□ -1.66
SSR1P43307 RPL23AP62-201ENST00000463396 453 ntBASIC4.69□□□□□ -1.66
SSR1P43307 RN7SL610P-201ENST00000463845 291 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC092905.1-201ENST00000467527 949 ntBASIC4.69□□□□□ -1.66
SSR1P43307 RN7SL354P-201ENST00000469282 294 ntBASIC4.69□□□□□ -1.66
SSR1P43307 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSR1P43307 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.69□□□□□ -1.66
SSR1P43307 AP001781.1-201ENST00000530977 207 ntBASIC4.69□□□□□ -1.66
SSR1P43307 OR5D15P-201ENST00000531671 942 ntBASIC4.69□□□□□ -1.66
SSR1P43307 MIR4270-201ENST00000581799 70 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.69□□□□□ -1.66
SSR1P43307 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 Z98200.1-201ENST00000607298 470 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AP002360.3-201ENST00000607673 710 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AL133243.1-201ENST00000614487 366 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC023509.5-201ENST00000617434 807 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC105105.5-201ENST00000622635 1294 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC006065.6-201ENST00000625201 545 ntBASIC4.69□□□□□ -1.66
SSR1P43307 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.69□□□□□ -1.66
SSR1P43307 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSR1P43307 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms