Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ANKRD26P4-201ENST00000455755 950 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 RN7SL188P-201ENST00000469842 285 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC092754.1-201ENST00000472975 479 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.04□□□□□ -1.44
CNGA1P29973 AC104689.1-201ENST00000473356 768 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.04□□□□□ -1.44
CNGA1P29973 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 MTCYBP16-201ENST00000509187 1129 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC048346.1-201ENST00000510247 144 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 RNA5SP135-201ENST00000517019 125 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 RNA5SP373-201ENST00000517271 95 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.04□□□□□ -1.44
CNGA1P29973 AC007834.2-201ENST00000536310 343 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.04□□□□□ -1.44
CNGA1P29973 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 BNIP3P26-201ENST00000600827 554 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC123786.2-201ENST00000603459 275 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 AL121890.2-201ENST00000617644 465 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CNGA1P29973 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CNGA1P29973 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 AL022311.1-201ENST00000623726 19416 ntBASIC6.04□□□□□ -1.44
CNGA1P29973 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.04□□□□□ -1.44
CNGA1P29973 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CNGA1P29973 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 SNURFL-201ENST00000309296 343 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CNGA1P29973 RNA5SP455-201ENST00000365190 119 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 RNU6-1151P-201ENST00000384684 107 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 RNU6-272P-201ENST00000411028 104 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AC245028.1-201ENST00000423259 256 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.03□□□□□ -1.44
CNGA1P29973 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.03□□□□□ -1.44
CNGA1P29973 MTND1P32-201ENST00000433043 938 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.03□□□□□ -1.44
CNGA1P29973 IGBP1P3-201ENST00000447449 1000 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.03□□□□□ -1.44
CNGA1P29973 AL671862.1-201ENST00000515851 349 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.03□□□□□ -1.44
CNGA1P29973 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 OSBPL9P5-201ENST00000542581 171 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 EDDM3DP-201ENST00000554692 434 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 MIR4697-201ENST00000582977 78 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AC009237.13-201ENST00000603193 276 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.03□□□□□ -1.44
CNGA1P29973 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AC005618.4-201ENST00000625053 554 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 AF001550.2-201ENST00000636643 217 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.03□□□□□ -1.44
CNGA1P29973 AC006206.1-201ENST00000544842 3387 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.03□□□□□ -1.44
CNGA1P29973 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CNGA1P29973 AC093591.2-201ENST00000565254 3843 ntBASIC6.03□□□□□ -1.44
CNGA1P29973 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
CNGA1P29973 SCARNA15-201ENST00000607520 4325 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.02□□□□□ -1.45
CNGA1P29973 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNGA1P29973 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CNGA1P29973 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CNGA1P29973 RNU6-157P-201ENST00000383957 107 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 TMSB4XP8-201ENST00000402089 135 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 NRBF2P2-201ENST00000413087 861 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 TMSB4XP6-201ENST00000415187 135 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.02□□□□□ -1.45
CNGA1P29973 COX6B1P1-201ENST00000415962 213 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 TMSB4XP1-201ENST00000424567 135 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 USP9YP9-201ENST00000429406 715 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 RPS26P40-201ENST00000435209 294 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CNGA1P29973 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.02□□□□□ -1.45
CNGA1P29973 RPS27AP15-201ENST00000447672 466 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 AC104634.1-201ENST00000452720 462 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 RFC5P1-201ENST00000454419 874 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.02□□□□□ -1.45
CNGA1P29973 AC108734.3-201ENST00000481241 1165 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 UBA52P3-201ENST00000491303 382 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 AC008897.1-201ENST00000494006 347 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 RN7SL591P-201ENST00000496150 292 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 AC010486.2-201ENST00000505572 483 ntBASIC6.02□□□□□ -1.45
CNGA1P29973 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms