Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 HSPE1P23-201ENST00000509838 286 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.04□□□□□ -1.28
RXRBP28702 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.04□□□□□ -1.28
RXRBP28702 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 AC090424.1-201ENST00000535243 736 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 UBE2NP1-201ENST00000545592 458 ntBASIC7.04□□□□□ -1.28
RXRBP28702 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.04□□□□□ -1.28
RXRBP28702 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.04□□□□□ -1.28
RXRBP28702 AADACP1-206ENST00000561502 1193 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AC127024.5-201ENST00000580085 462 ntBASIC7.04□□□□□ -1.28
RXRBP28702 H3F3BP2-201ENST00000583907 357 ntBASIC7.04□□□□□ -1.28
RXRBP28702 KPNA2P3-201ENST00000584190 848 ntBASIC7.04□□□□□ -1.28
RXRBP28702 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.04□□□□□ -1.28
RXRBP28702 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 AC099654.14-201ENST00000638599 341 ntBASIC7.04□□□□□ -1.28
RXRBP28702 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.04□□□□□ -1.28
RXRBP28702 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 AL078621.3-201ENST00000623707 2042 ntBASIC7.04□□□□□ -1.28
RXRBP28702 CARF-208ENST00000428585 2513 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RXRBP28702 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RXRBP28702 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RXRBP28702 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.04□□□□□ -1.28
RXRBP28702 AC110716.2-201ENST00000563865 3945 ntBASIC7.04□□□□□ -1.28
RXRBP28702 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RXRBP28702 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RXRBP28702 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 AC097063.1-201ENST00000426714 1797 ntBASIC7.03□□□□□ -1.28
RXRBP28702 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 NACA3P-201ENST00000359690 648 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AL451142.1-201ENST00000375867 775 ntBASIC7.03□□□□□ -1.28
RXRBP28702 XGY1-201ENST00000381172 446 ntBASIC7.03□□□□□ -1.28
RXRBP28702 EIF4EBP2P3-201ENST00000403144 334 ntBASIC7.03□□□□□ -1.28
RXRBP28702 RNU4-25P-201ENST00000410569 230 ntBASIC7.03□□□□□ -1.28
RXRBP28702 MTATP6P27-201ENST00000416987 621 ntBASIC7.03□□□□□ -1.28
RXRBP28702 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.03□□□□□ -1.28
RXRBP28702 RPS4XP16-201ENST00000427198 791 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AL731534.1-201ENST00000434711 269 ntBASIC7.03□□□□□ -1.28
RXRBP28702 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.03□□□□□ -1.28
RXRBP28702 EEF1E1P1-201ENST00000446998 430 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC114755.5-201ENST00000447760 831 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AL627224.1-201ENST00000448334 444 ntBASIC7.03□□□□□ -1.28
RXRBP28702 MTND5P20-201ENST00000448677 143 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 AC022336.1-201ENST00000475510 337 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC069528.1-202ENST00000482888 637 ntBASIC7.03□□□□□ -1.28
RXRBP28702 SUMO1P1-201ENST00000497904 306 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 AK4P6-201ENST00000505168 528 ntBASIC7.03□□□□□ -1.28
RXRBP28702 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 AC025881.1-201ENST00000518851 512 ntBASIC7.03□□□□□ -1.28
RXRBP28702 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.03□□□□□ -1.28
RXRBP28702 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 GLYCAM1-201ENST00000546596 285 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC133555.2-201ENST00000550213 292 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.03□□□□□ -1.28
RXRBP28702 AL512782.1-201ENST00000603093 364 ntBASIC7.03□□□□□ -1.28
RXRBP28702 AC083899.3-201ENST00000603413 594 ntBASIC7.03□□□□□ -1.28
RXRBP28702 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.03□□□□□ -1.28
RXRBP28702 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RXRBP28702 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.02□□□□□ -1.28
RXRBP28702 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
RXRBP28702 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 AC073365.1-203ENST00000641055 1992 ntBASIC7.02□□□□□ -1.29
RXRBP28702 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.02□□□□□ -1.29
RXRBP28702 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 MTND5P17-201ENST00000418405 1603 ntBASIC7.02□□□□□ -1.29
RXRBP28702 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.02□□□□□ -1.29
RXRBP28702 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
RXRBP28702 RNA5SP191-201ENST00000362585 102 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RN7SKP145-201ENST00000363291 303 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms