Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC112694.2-201ENST00000623697 768 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TNFSF4P23510 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.88□□□□□ -1.63
TNFSF4P23510 OR8B1P-202ENST00000641132 1178 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.88□□□□□ -1.63
TNFSF4P23510 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFSF4P23510 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFSF4P23510 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFSF4P23510 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.88□□□□□ -1.63
TNFSF4P23510 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 AP000526.1-201ENST00000603308 1388 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 AL079343.1-201ENST00000572358 1771 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 AC008079.2-201ENST00000623543 20396 ntBASIC4.88□□□□□ -1.63
TNFSF4P23510 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFSF4P23510 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TNFSF4P23510 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TNFSF4P23510 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TNFSF4P23510 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 Z95331.1-201ENST00000623075 23112 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AL391994.1-201ENST00000254724 282 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TNFSF4P23510 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 RNA5SP435-201ENST00000364044 108 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 RN7SKP15-201ENST00000364742 309 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 SNORA51.6-201ENST00000384151 125 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TNFSF4P23510 SNRPEP2-201ENST00000397592 279 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 SNORA11.3-201ENST00000408471 128 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 USP9YP33-201ENST00000412220 421 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC011233.1-201ENST00000422812 283 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AL365203.2-201ENST00000423444 196 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 USP9YP35-201ENST00000435696 412 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC144530.1-201ENST00000452862 555 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 RPL5P22-201ENST00000480199 884 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 RPL32P33-201ENST00000487023 394 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 RNU6-615P-201ENST00000516065 106 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.87□□□□□ -1.63
TNFSF4P23510 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC126615.2-201ENST00000553003 515 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC008088.1-201ENST00000580993 280 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AL159169.3-201ENST00000608871 561 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC243773.3-201ENST00000613270 256 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC009704.2-201ENST00000618739 483 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 SNORA11.6-201ENST00000619030 128 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC138965.3-201ENST00000623875 498 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 AC004943.3-201ENST00000624116 600 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 CASC19-222ENST00000641321 1173 ntBASIC4.87□□□□□ -1.63
TNFSF4P23510 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.87□□□□□ -1.63
TNFSF4P23510 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TNFSF4P23510 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.87□□□□□ -1.63
TNFSF4P23510 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TNFSF4P23510 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TNFSF4P23510 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms