Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 AL133215.3-201ENST00000609801 448 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 AL589743.6-201ENST00000611025 117 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 MIR6885-201ENST00000612241 66 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 DISC2.1-201ENST00000612827 205 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 MIR6774-201ENST00000614651 70 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.49□□□□□ -1.37
NFKB1P19838 C2orf27A-204ENST00000623058 969 ntBASIC6.49□□□□□ -1.37
NFKB1P19838 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.49□□□□□ -1.37
NFKB1P19838 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NFKB1P19838 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.49□□□□□ -1.37
NFKB1P19838 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.49□□□□□ -1.37
NFKB1P19838 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.49□□□□□ -1.37
NFKB1P19838 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NFKB1P19838 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.49□□□□□ -1.37
NFKB1P19838 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NFKB1P19838 LINC00622-201ENST00000562811 1570 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 IGKV7-3-201ENST00000357453 298 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 RNU6-115P-201ENST00000364310 107 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 RNA5SP478-201ENST00000364657 115 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 Y_RNA.315-201ENST00000365117 102 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 RN7SKP29-201ENST00000410957 272 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 CYP4F30P-202ENST00000420048 405 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC007568.1-201ENST00000422912 471 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 AL121776.1-201ENST00000429337 372 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 GAPDHP19-201ENST00000431768 1005 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC128677.1-201ENST00000436016 442 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 BX679664.2-201ENST00000439282 283 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AL031681.1-201ENST00000443304 400 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 Y_RNA.632-201ENST00000459189 102 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 RNA5SP418-201ENST00000515951 117 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 IGKV2D-10-201ENST00000520194 281 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 HIGD1AP6-201ENST00000521833 279 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC009120.3-201ENST00000563335 499 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC093249.1-201ENST00000567049 203 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 MIR3171-201ENST00000584270 74 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AC009027.1-201ENST00000604510 479 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 AL031658.2-201ENST00000616850 651 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.48□□□□□ -1.37
NFKB1P19838 AC100810.6-201ENST00000638068 285 ntBASIC6.48□□□□□ -1.37
NFKB1P19838 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.48□□□□□ -1.37
NFKB1P19838 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
NFKB1P19838 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NFKB1P19838 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NFKB1P19838 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.47□□□□□ -1.37
NFKB1P19838 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.47□□□□□ -1.37
NFKB1P19838 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.47□□□□□ -1.37
NFKB1P19838 AC006511.3-201ENST00000624929 1783 ntBASIC6.47□□□□□ -1.37
NFKB1P19838 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.47□□□□□ -1.37
NFKB1P19838 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NFKB1P19838 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms