Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGA1P17096 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
HMGA1P17096 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 OR4A15-201ENST00000314706 1035 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA1P17096 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA1P17096 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 RN7SKP156-201ENST00000410308 342 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 EIF4EP1-201ENST00000422311 642 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 SETP9-201ENST00000423837 832 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 DYNLL1P7-201ENST00000429273 258 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGA1P17096 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA1P17096 NDUFB4P12-201ENST00000513465 390 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGA1P17096 AC069240.1-201ENST00000548774 375 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 GLRXP2-201ENST00000555594 321 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 AC087499.8-201ENST00000578406 226 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGA1P17096 AC124312.6-202ENST00000623624 418 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA1P17096 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA1P17096 SAMMSON-213ENST00000641336 1521 ntBASIC4.11□□□□□ -1.75
HMGA1P17096 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGA1P17096 AC090220.1-201ENST00000593078 1699 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HMGA1P17096 SNORA73.2-201ENST00000364946 201 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 SNORA3.3-201ENST00000408712 125 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGA1P17096 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGA1P17096 MTCO1P54-201ENST00000430139 712 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 GOT2P5-201ENST00000433995 546 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 CYCSP53-201ENST00000455540 265 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 TRMT10BP1-201ENST00000519377 943 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.1□□□□□ -1.75
HMGA1P17096 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGA1P17096 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGA1P17096 MTND6P33-201ENST00000571794 183 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 AL121834.1-201ENST00000572284 509 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 AC053481.3-201ENST00000577881 843 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGA1P17096 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGA1P17096 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
HMGA1P17096 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
HMGA1P17096 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGA1P17096 AC015813.6-201ENST00000624409 5808 ntBASIC4.1□□□□□ -1.75
HMGA1P17096 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGA1P17096 AL161912.2-201ENST00000565707 3007 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGA1P17096 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGA1P17096 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGA1P17096 RNA5SP97-201ENST00000365006 84 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 MIR670-201ENST00000390142 98 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 MIR1251-201ENST00000408552 70 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGA1P17096 OR4F13P-201ENST00000428478 931 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 NPM1P34-201ENST00000428821 893 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 ARL4AP4-201ENST00000434170 518 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGA1P17096 ACTR3P3-201ENST00000480448 893 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AC017037.1-201ENST00000508460 471 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGA1P17096 RNA5SP143-201ENST00000516936 115 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 HMGN2P47-201ENST00000559378 272 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGA1P17096 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGA1P17096 BNIP3P33-201ENST00000598912 569 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGA1P17096 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AF001550.2-201ENST00000636643 217 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
HMGA1P17096 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGA1P17096 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HMGA1P17096 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGA1P17096 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGA1P17096 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
HMGA1P17096 HSPD1P11-201ENST00000508643 1702 ntBASIC4.09□□□□□ -1.76
HMGA1P17096 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.09□□□□□ -1.76
HMGA1P17096 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
HMGA1P17096 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGA1P17096 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.09□□□□□ -1.76
HMGA1P17096 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms