Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC140479.3-201ENST00000418944 1126 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC069213.2-201ENST00000420238 366 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC1P07992 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC079168.2-201ENST00000453977 416 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC104763.1-201ENST00000475274 360 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 UBTFL6-201ENST00000477929 1024 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC023050.1-201ENST00000498198 304 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC093720.1-201ENST00000505681 714 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC1P07992 OR51K1P-201ENST00000510214 950 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC016550.3-201ENST00000515706 767 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC104997.1-201ENST00000519761 717 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC1P07992 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC100770.1-201ENST00000532310 322 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC1P07992 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.01□□□□□ -1.77
ERCC1P07992 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ERCC1P07992 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ERCC1P07992 ELOCP28-201ENST00000590044 317 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC023762.1-201ENST00000603280 584 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC010680.3-201ENST00000604215 520 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC1P07992 SNX18P1Y-201ENST00000616231 511 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AL035461.2-201ENST00000619201 524 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ERCC1P07992 AC002044.3-201ENST00000623314 541 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 AP000843.1-201ENST00000624880 701 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ERCC1P07992 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ERCC1P07992 AC011266.1-201ENST00000624119 3569 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 DHX40P1-201ENST00000588725 1412 ntBASIC4.01□□□□□ -1.77
ERCC1P07992 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ERCC1P07992 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC1P07992 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ERCC1P07992 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC1P07992 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC1P07992 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ERCC1P07992 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ERCC1P07992 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
ERCC1P07992 SUPT16HP1-201ENST00000537175 3133 ntBASIC4□□□□□ -1.77
ERCC1P07992 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 PNPT1P2-201ENST00000456768 2050 ntBASIC4□□□□□ -1.77
ERCC1P07992 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 RNA5SP22-201ENST00000365393 109 ntBASIC4□□□□□ -1.77
ERCC1P07992 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
ERCC1P07992 RNA5SP397-201ENST00000391323 118 ntBASIC4□□□□□ -1.77
ERCC1P07992 SDHCP2-201ENST00000398565 501 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4□□□□□ -1.77
ERCC1P07992 AC062016.2-201ENST00000420950 676 ntBASIC4□□□□□ -1.77
ERCC1P07992 EIF4EP1-201ENST00000422311 642 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4□□□□□ -1.77
ERCC1P07992 AL645608.4-201ENST00000423619 154 ntBASIC4□□□□□ -1.77
ERCC1P07992 CENPIP1-201ENST00000425713 902 ntBASIC4□□□□□ -1.77
ERCC1P07992 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 AC011998.1-201ENST00000433403 117 ntBASIC4□□□□□ -1.77
ERCC1P07992 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4□□□□□ -1.77
ERCC1P07992 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4□□□□□ -1.77
ERCC1P07992 TPT1P12-201ENST00000448968 492 ntBASIC4□□□□□ -1.77
ERCC1P07992 VN1R32P-201ENST00000452234 905 ntBASIC4□□□□□ -1.77
ERCC1P07992 HMGB1P26-201ENST00000452520 628 ntBASIC4□□□□□ -1.77
ERCC1P07992 Z95152.1-201ENST00000453556 656 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4□□□□□ -1.77
ERCC1P07992 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4□□□□□ -1.77
ERCC1P07992 RNA5SP446-201ENST00000515955 82 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4□□□□□ -1.77
ERCC1P07992 AC009643.1-201ENST00000532030 391 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 AC074029.2-201ENST00000551045 634 ntBASIC4□□□□□ -1.77
ERCC1P07992 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4□□□□□ -1.77
ERCC1P07992 MIR4458-201ENST00000578872 75 ntBASIC4□□□□□ -1.77
ERCC1P07992 AC011477.5-201ENST00000586571 259 ntBASIC4□□□□□ -1.77
ERCC1P07992 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4□□□□□ -1.77
ERCC1P07992 AC090525.3-201ENST00000605601 189 ntBASIC4□□□□□ -1.77
ERCC1P07992 AL023583.1-201ENST00000607518 1143 ntBASIC4□□□□□ -1.77
ERCC1P07992 OR6R2P-201ENST00000609216 300 ntBASIC4□□□□□ -1.77
ERCC1P07992 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4□□□□□ -1.77
ERCC1P07992 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4□□□□□ -1.77
ERCC1P07992 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4□□□□□ -1.77
ERCC1P07992 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 USP9YP4-201ENST00000424401 1745 ntBASIC4□□□□□ -1.77
ERCC1P07992 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC1P07992 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4□□□□□ -1.77
ERCC1P07992 KARSP3-201ENST00000571212 1504 ntBASIC4□□□□□ -1.77
ERCC1P07992 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC1P07992 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms