Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 AL645568.2-201ENST00000432815 1337 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COL3A1P02461 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 RNU6-891P-201ENST00000384280 111 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 VN1R51P-201ENST00000411675 945 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 AC107081.1-201ENST00000414975 361 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 SKP1P3-201ENST00000429280 487 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.71□□□□□ -1.5
COL3A1P02461 KCTD10P1-201ENST00000434203 625 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 MTND1P34-201ENST00000438556 671 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AL591719.1-201ENST00000444669 744 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 RNA5SP103-201ENST00000459503 118 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.71□□□□□ -1.5
COL3A1P02461 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.71□□□□□ -1.5
COL3A1P02461 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.71□□□□□ -1.5
COL3A1P02461 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.71□□□□□ -1.5
COL3A1P02461 HAUS1P3-201ENST00000523909 662 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL3A1P02461 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL3A1P02461 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.71□□□□□ -1.5
COL3A1P02461 AC067959.1-201ENST00000604334 379 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AC018926.1-201ENST00000616335 435 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AC007275.1-201ENST00000621243 671 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 AC092184.1-201ENST00000625042 715 ntBASIC5.71□□□□□ -1.5
COL3A1P02461 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 MAPK10-286ENST00000641208 8747 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL3A1P02461 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL3A1P02461 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL3A1P02461 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AL356095.1-201ENST00000417217 199 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.7□□□□□ -1.5
COL3A1P02461 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 RCC2P2-201ENST00000422174 918 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 AL645931.1-201ENST00000439737 410 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 HMGN1P8-201ENST00000463578 288 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 PRELID3BP6-201ENST00000503839 571 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC112673.1-201ENST00000513168 575 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 RN7SKP46-201ENST00000515942 234 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 OR7E10P-201ENST00000526420 991 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC006064.5-201ENST00000541782 248 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC015726.1-201ENST00000602353 681 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC008121.2-201ENST00000614647 523 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 AC079395.3-201ENST00000615161 484 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.7□□□□□ -1.5
COL3A1P02461 AC132825.7-201ENST00000638744 335 ntBASIC5.7□□□□□ -1.5
COL3A1P02461 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL3A1P02461 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL3A1P02461 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.69□□□□□ -1.5
COL3A1P02461 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.69□□□□□ -1.5
COL3A1P02461 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL3A1P02461 RNA5SP388-201ENST00000362584 119 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL3A1P02461 AL022722.2-201ENST00000402519 180 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 USP9YP21-201ENST00000420603 432 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 AL512326.1-201ENST00000443050 721 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 RPL7P22-201ENST00000466005 733 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 AC105137.1-201ENST00000484355 562 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 RN7SL604P-201ENST00000492589 296 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.69□□□□□ -1.5
COL3A1P02461 AC099522.1-202ENST00000514718 367 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 Y_RNA.688-201ENST00000516565 95 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.69□□□□□ -1.5
COL3A1P02461 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.69□□□□□ -1.5
COL3A1P02461 AC023824.3-201ENST00000569003 562 ntBASIC5.69□□□□□ -1.5
COL3A1P02461 AC245008.1-201ENST00000608123 476 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms