Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHOX2O60902 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHOX2O60902 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.22□□□□□ -1.73
SHOX2O60902 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SHOX2O60902 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHOX2O60902 INTS6P1-201ENST00000504674 2530 ntBASIC4.22□□□□□ -1.73
SHOX2O60902 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.22□□□□□ -1.73
SHOX2O60902 LINC02471-203ENST00000641941 4752 ntBASIC4.21□□□□□ -1.73
SHOX2O60902 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 RNA5SP305-201ENST00000362665 119 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 MIR659-201ENST00000384963 97 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 RPS12P10-201ENST00000427031 377 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 TRGV7-201ENST00000427089 353 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 RN7SL812P-201ENST00000493791 279 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.21□□□□□ -1.74
SHOX2O60902 IGKV2D-23-201ENST00000518179 286 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.21□□□□□ -1.74
SHOX2O60902 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC021483.2-201ENST00000567415 758 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 AC136624.4-201ENST00000573044 370 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.21□□□□□ -1.74
SHOX2O60902 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC133644.2-201ENST00000608142 540 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.21□□□□□ -1.74
SHOX2O60902 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 AL391261.4-201ENST00000616012 481 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 AP005264.7-201ENST00000625003 745 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 AC095050.2-201ENST00000510748 1458 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 UBE3AP2-201ENST00000429033 2259 ntBASIC4.21□□□□□ -1.74
SHOX2O60902 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHOX2O60902 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.21□□□□□ -1.74
SHOX2O60902 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 CR381670.1-201ENST00000624291 1693 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
SHOX2O60902 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 SNORA51.8-201ENST00000384234 132 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 AC092570.3-201ENST00000420113 693 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 AL590609.2-201ENST00000421430 368 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 RPL21P109-201ENST00000422213 475 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 NRBF2P3-201ENST00000432731 865 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 BMS1P19-201ENST00000433925 393 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 VN1R25P-201ENST00000443385 738 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 EXTL2P1-201ENST00000446218 416 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 AC022431.1-201ENST00000450941 438 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 VN1R40P-201ENST00000455196 941 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.2□□□□□ -1.74
SHOX2O60902 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.2□□□□□ -1.74
SHOX2O60902 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.2□□□□□ -1.74
SHOX2O60902 RN7SKP276-201ENST00000516242 268 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 OR5AZ1P-201ENST00000527448 943 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 OR5BC1P-201ENST00000529327 739 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 AC137768.1-201ENST00000549998 553 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.2□□□□□ -1.74
SHOX2O60902 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.2□□□□□ -1.74
SHOX2O60902 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
SHOX2O60902 EIF1P6-201ENST00000600054 334 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 AL021997.2-201ENST00000615674 271 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 AC087385.3-201ENST00000620477 187 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.2□□□□□ -1.74
SHOX2O60902 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHOX2O60902 AC092162.3-201ENST00000624511 1624 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 PNPT1P2-201ENST00000456768 2050 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHOX2O60902 AC007342.7-201ENST00000624610 2337 ntBASIC4.2□□□□□ -1.74
SHOX2O60902 AC134882.1-201ENST00000603738 1676 ntBASIC4.19□□□□□ -1.74
SHOX2O60902 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHOX2O60902 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHOX2O60902 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms