Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU6-244P-201ENST00000391028 104 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 OR6C69P-201ENST00000394268 893 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 RNA5SP146-201ENST00000410743 123 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN3O15551 NRBF2P2-201ENST00000413087 861 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC092013.1-201ENST00000438795 332 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 RPS20P4-201ENST00000461659 355 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 RPL7P22-201ENST00000466005 733 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN3O15551 RPL35P6-201ENST00000490024 372 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC083829.1-201ENST00000503756 657 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 PARP4P3-201ENST00000510265 317 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC016550.3-201ENST00000515706 767 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN3O15551 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN3O15551 IGLV3-26-201ENST00000520756 302 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC100770.1-201ENST00000532310 322 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN3O15551 AC023575.1-201ENST00000580510 358 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 KPNA2P3-201ENST00000584190 848 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN3O15551 MIR3138-201ENST00000585238 82 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC008759.1-201ENST00000589783 983 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 IPO5P1-202ENST00000600039 287 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC083809.1-201ENST00000615051 472 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 AC006338.2-201ENST00000616864 791 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 MIR6810-201ENST00000622701 70 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLDN3O15551 MIR6830-201ENST00000636015 70 ntBASIC4.72□□□□□ -1.65
CLDN3O15551 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN3O15551 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CLDN3O15551 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CLDN3O15551 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CLDN3O15551 AL592182.3-201ENST00000642132 3304 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLDN3O15551 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN3O15551 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 MIR1911-201ENST00000410783 80 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 RAB28P1-201ENST00000411517 641 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 UBTFL3-201ENST00000418934 1024 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AL157831.1-201ENST00000426134 473 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 MTCO1P57-201ENST00000432182 261 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 CEACAMP1-201ENST00000434624 1035 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 RPS20P1-201ENST00000434853 354 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 RPL12P46-201ENST00000436610 195 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 RNU6-1218P-201ENST00000458990 108 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 UBTFL6-201ENST00000477929 1024 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AC091167.1-201ENST00000492017 396 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 STMN1P2-201ENST00000508435 439 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AC002456.2-201ENST00000509356 380 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 NPM1P6-201ENST00000521088 871 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN3O15551 SS18L2P2-201ENST00000583960 235 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 MIMT1-201ENST00000597105 1050 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 PSMA6P4-201ENST00000603247 718 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AC005034.4-201ENST00000603612 899 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 AC010200.2-201ENST00000605098 235 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 uc_338.9-201ENST00000617424 182 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLDN3O15551 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLDN3O15551 ASNSP1-201ENST00000518311 1939 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.71□□□□□ -1.66
CLDN3O15551 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLDN3O15551 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLDN3O15551 AL359715.4-201ENST00000606629 1436 ntBASIC4.71□□□□□ -1.66
CLDN3O15551 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.71□□□□□ -1.66
CLDN3O15551 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN3O15551 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.7□□□□□ -1.66
CLDN3O15551 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN3O15551 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLDN3O15551 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
CLDN3O15551 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLDN3O15551 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN3O15551 MIR92A2-201ENST00000385299 75 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AL583835.1-201ENST00000399570 407 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AL035696.2-201ENST00000407941 709 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN3O15551 RPL23AP26-201ENST00000412728 464 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AL512504.1-201ENST00000415494 778 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.7□□□□□ -1.66
CLDN3O15551 AL158073.1-201ENST00000426848 1104 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AC009963.2-201ENST00000453431 138 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
CLDN3O15551 PPIAP21-201ENST00000464473 501 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 RN7SL385P-201ENST00000468873 276 ntBASIC4.7□□□□□ -1.66
CLDN3O15551 AC010618.1-201ENST00000469924 477 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms