Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.27□□□□□ -1.73
LSM1O15116 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.27□□□□□ -1.73
LSM1O15116 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.27□□□□□ -1.73
LSM1O15116 AC119674.1-212ENST00000641155 993 ntBASIC4.27□□□□□ -1.73
LSM1O15116 MAPK10-372ENST00000641954 3413 ntBASIC4.27□□□□□ -1.73
LSM1O15116 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LSM1O15116 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LSM1O15116 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LSM1O15116 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LSM1O15116 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LSM1O15116 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LSM1O15116 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LSM1O15116 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LSM1O15116 OTUD4P1-201ENST00000237841 3067 ntBASIC4.26□□□□□ -1.73
LSM1O15116 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LSM1O15116 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
LSM1O15116 RNU1-15P-201ENST00000353977 144 ntBASIC4.26□□□□□ -1.73
LSM1O15116 RNU1-87P-201ENST00000363727 170 ntBASIC4.26□□□□□ -1.73
LSM1O15116 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LSM1O15116 MIR92A2-201ENST00000385299 75 ntBASIC4.26□□□□□ -1.73
LSM1O15116 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.26□□□□□ -1.73
LSM1O15116 RNA5SP397-201ENST00000391323 118 ntBASIC4.26□□□□□ -1.73
LSM1O15116 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.26□□□□□ -1.73
LSM1O15116 BTF3P9-201ENST00000418784 283 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 AC104837.2-201ENST00000427236 424 ntBASIC4.26□□□□□ -1.73
LSM1O15116 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 ARL5AP3-201ENST00000439327 386 ntBASIC4.26□□□□□ -1.73
LSM1O15116 UBE2V1P3-201ENST00000439651 417 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC079804.1-201ENST00000461922 436 ntBASIC4.26□□□□□ -1.73
LSM1O15116 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.26□□□□□ -1.73
LSM1O15116 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 RPS26P15-201ENST00000488067 348 ntBASIC4.26□□□□□ -1.73
LSM1O15116 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LSM1O15116 ATG10-AS1-201ENST00000504846 648 ntBASIC4.26□□□□□ -1.73
LSM1O15116 SNORA70.14-201ENST00000516205 110 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 AP001922.4-201ENST00000526967 290 ntBASIC4.26□□□□□ -1.73
LSM1O15116 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.26□□□□□ -1.73
LSM1O15116 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.26□□□□□ -1.73
LSM1O15116 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.26□□□□□ -1.73
LSM1O15116 AC092868.3-201ENST00000560515 784 ntBASIC4.26□□□□□ -1.73
LSM1O15116 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.26□□□□□ -1.73
LSM1O15116 AC124068.1-201ENST00000563131 678 ntBASIC4.26□□□□□ -1.73
LSM1O15116 MIR3934-201ENST00000579806 107 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.26□□□□□ -1.73
LSM1O15116 HMGB1P50-201ENST00000605814 607 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC090510.2-201ENST00000617465 629 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LSM1O15116 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.26□□□□□ -1.73
LSM1O15116 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LSM1O15116 LINC01808-202ENST00000641680 1116 ntBASIC4.26□□□□□ -1.73
LSM1O15116 AP001486.2-201ENST00000561652 5113 ntBASIC4.26□□□□□ -1.73
LSM1O15116 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LSM1O15116 AC053481.2-202ENST00000582394 1500 ntBASIC4.26□□□□□ -1.73
LSM1O15116 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 EXOC5P1-201ENST00000510543 1969 ntBASIC4.25□□□□□ -1.73
LSM1O15116 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LSM1O15116 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LSM1O15116 RNA5SP87-201ENST00000384155 118 ntBASIC4.25□□□□□ -1.73
LSM1O15116 GLULP6-201ENST00000399502 913 ntBASIC4.25□□□□□ -1.73
LSM1O15116 RN7SKP177-201ENST00000410567 355 ntBASIC4.25□□□□□ -1.73
LSM1O15116 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 AC007563.3-201ENST00000433233 371 ntBASIC4.25□□□□□ -1.73
LSM1O15116 VN1R54P-201ENST00000435210 1049 ntBASIC4.25□□□□□ -1.73
LSM1O15116 PTMAP6-201ENST00000439110 327 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC073648.4-201ENST00000442655 781 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.25□□□□□ -1.73
LSM1O15116 RPL23AP71-201ENST00000470966 469 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.25□□□□□ -1.73
LSM1O15116 CDH12P2-201ENST00000504393 298 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC008638.1-201ENST00000506035 866 ntBASIC4.25□□□□□ -1.73
LSM1O15116 NDUFB5P1-201ENST00000508134 564 ntBASIC4.25□□□□□ -1.73
LSM1O15116 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
LSM1O15116 OR7H2P-201ENST00000513483 306 ntBASIC4.25□□□□□ -1.73
LSM1O15116 ACTR6P1-201ENST00000514311 1104 ntBASIC4.25□□□□□ -1.73
LSM1O15116 IGKV1-32-201ENST00000519290 311 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.25□□□□□ -1.73
LSM1O15116 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.25□□□□□ -1.73
LSM1O15116 BRD9P1-201ENST00000529855 560 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 AC016180.1-201ENST00000567945 403 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
LSM1O15116 AC110743.1-201ENST00000584870 478 ntBASIC4.25□□□□□ -1.73
LSM1O15116 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.25□□□□□ -1.73
LSM1O15116 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.25□□□□□ -1.73
LSM1O15116 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.25□□□□□ -1.73
LSM1O15116 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms