Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 AC017079.1-201ENST00000333650 415 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 RNU4-92P-201ENST00000363783 136 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 AC019155.1-201ENST00000382242 574 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 MIR223-201ENST00000385204 110 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 LRRC37BP1-201ENST00000398851 714 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXN3O00409 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXN3O00409 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 AC009965.2-201ENST00000425328 970 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXN3O00409 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXN3O00409 RPS29P9-201ENST00000440360 171 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 CNOT7P2-201ENST00000441051 832 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 HMGB3P9-201ENST00000441799 583 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 RPL34P20-201ENST00000442771 351 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 TCEA1P1-201ENST00000449716 880 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 MTCO2P6-201ENST00000463134 685 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 CCDC75P1-201ENST00000469247 791 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 BX284632.1-201ENST00000478218 541 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 AC090114.3-201ENST00000479267 829 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 RN7SL30P-201ENST00000488416 306 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 DYNLL1P6-201ENST00000503440 264 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 AC109471.1-201ENST00000511631 612 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXN3O00409 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXN3O00409 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 AC007225.2-201ENST00000562529 256 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 AC231759.1-201ENST00000616455 597 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 Z99129.2-201ENST00000619967 314 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 MFSD8-245ENST00000641743 948 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 SAMMSON-227ENST00000642114 1199 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 SGO1P1-201ENST00000603525 1447 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXN3O00409 AL353743.4-201ENST00000422653 1547 ntBASIC5.38□□□□□ -1.55
FOXN3O00409 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
FOXN3O00409 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
FOXN3O00409 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXN3O00409 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXN3O00409 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXN3O00409 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC092079.1-201ENST00000558620 1985 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 RNU6-707P-201ENST00000364647 95 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 RNU4-28P-201ENST00000364739 141 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 SNORD116.1-201ENST00000365628 92 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 SNORA70.10-201ENST00000384515 134 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 MIR16-1-201ENST00000385271 89 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AL590084.1-201ENST00000407885 387 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 U3.36-201ENST00000408418 213 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 RNU6-272P-201ENST00000411028 104 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC005033.1-201ENST00000428904 813 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXN3O00409 AL117351.1-201ENST00000438864 766 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AC004865.1-201ENST00000442276 1003 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC233982.1-201ENST00000451247 436 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 APOOP2-201ENST00000461561 539 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 RPS26P39-201ENST00000469206 341 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 RPS18P6-201ENST00000476880 458 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXN3O00409 HMGN2P25-201ENST00000486956 268 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXN3O00409 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 LSM3P2-201ENST00000551246 273 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AC004825.1-201ENST00000555068 586 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms