Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC113430.1-201ENST00000506872 718 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 MTCO3P27-201ENST00000514397 196 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC112198.4-201ENST00000515450 351 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 RNU5A-7P-201ENST00000515979 116 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AP003355.1-201ENST00000518956 587 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 IGKV2-36-201ENST00000519999 223 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 OR5M2P-201ENST00000529003 936 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC068339.2-201ENST00000534395 618 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 DNAJC19P3-201ENST00000594491 331 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC021851.1-201ENST00000608537 1082 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 OR2BH1P-201ENST00000608850 864 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC078880.5-201ENST00000617845 421 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AL669942.2-201ENST00000620352 697 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC138907.10-201ENST00000623708 983 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 AL590396.2-201ENST00000636511 1041 ntBASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPIPA3F8WFD2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 LINC01109-201ENST00000603837 3081 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL442639.1-201ENST00000625030 1899 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 RNU6-543P-201ENST00000362576 108 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 DEFB130D-201ENST00000426866 237 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 FO393414.1-201ENST00000428697 1184 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 CEACAMP6-201ENST00000452007 574 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC006511.1-201ENST00000470614 315 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 TRBV8-2-201ENST00000475637 270 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC090686.1-201ENST00000481577 749 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 SCARNA22-201ENST00000503991 125 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 HMGB3P16-201ENST00000508037 287 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC091868.1-201ENST00000508746 304 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC027104.1-201ENST00000563702 681 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC124283.4-201ENST00000581815 456 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC115085.1-201ENST00000588924 229 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC068790.7-201ENST00000602347 528 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC093765.1-201ENST00000603758 881 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC019193.2-201ENST00000610012 634 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 ATE1-AS1-202ENST00000636460 506 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 AL359922.3-201ENST00000624779 1670 ntBASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPIPA3F8WFD2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms