Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AL355816.1-201ENST00000607951 118 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL589743.7-201ENST00000612637 233 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL139099.4-201ENST00000614802 114 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC007742.2-201ENST00000618226 398 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC072046.2-201ENST00000618366 268 ntBASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CGB1A6NKQ9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL360270.2-201ENST00000562952 5985 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR10J6P-201ENST00000289731 930 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 FGF7P2-201ENST00000332473 296 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RNA5SP500-201ENST00000364486 119 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RN7SKP29-201ENST00000410957 272 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 NPM1P4-201ENST00000414095 812 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RPL23AP39-201ENST00000415533 405 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 MRPS36P1-201ENST00000421291 307 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC009965.2-201ENST00000425328 970 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RPS26P47-201ENST00000427219 348 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 TMX2P1-201ENST00000436507 708 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 TIMM8BP2-201ENST00000445940 251 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC114755.5-201ENST00000447760 831 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC098847.1-201ENST00000473094 348 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RN7SL193P-201ENST00000491708 276 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 DEFB108A-201ENST00000530110 222 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC005832.3-201ENST00000537929 631 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR4K7P-201ENST00000580232 945 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AP005262.1-201ENST00000582646 997 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC015712.7-201ENST00000615211 635 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC007014.2-201ENST00000615581 479 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC123768.4-201ENST00000616244 701 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR5H6-203ENST00000642105 978 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 OR9K1P-202ENST00000641111 3217 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 NSRP1P1-201ENST00000444067 1693 ntBASIC4.6□□□□□ -1.67
CGB1A6NKQ9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CGB1A6NKQ9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CGB1A6NKQ9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms