Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.44□□□□□ -1.86
TMEM235A6NFC5 AC116667.1-201ENST00000604855 2072 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AC103591.2-201ENST00000265259 766 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RNU1-18P-201ENST00000363062 164 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RNU6-1263P-201ENST00000384601 106 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MIR1251-201ENST00000408552 70 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RNU2-50P-201ENST00000410494 143 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MTND4LP21-201ENST00000415303 295 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 OR6K4P-201ENST00000423179 955 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL365396.1-201ENST00000430854 671 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 KCTD9P3-201ENST00000434597 1169 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RPS26P40-201ENST00000435209 294 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 VN1R54P-201ENST00000435210 1049 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RPL35P6-201ENST00000490024 372 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RN7SL691P-201ENST00000494487 301 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 IGHV3-32-201ENST00000519182 355 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TRAV8-5-201ENST00000537369 341 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MIR4436B2-201ENST00000581415 91 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MIR4436B1-201ENST00000583272 91 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 VN1R81P-201ENST00000602085 372 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AL034351.1-201ENST00000605288 668 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AC090948.1-201ENST00000607464 549 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 FAM25E-202ENST00000608562 189 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 AP003499.2-201ENST00000624100 483 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MFSD8-216ENST00000641147 4009 ntBASIC3.43□□□□□ -1.86
TMEM235A6NFC5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
TMEM235A6NFC5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC106871.1-201ENST00000568324 3102 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC007342.7-201ENST00000624610 2337 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 OR11H4-201ENST00000315409 1082 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RNU6-167P-201ENST00000384292 106 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 HMGN2P8-201ENST00000391458 268 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RN7SKP278-201ENST00000410504 342 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 VN1R31P-201ENST00000417498 730 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 CHIAP3-201ENST00000423668 1133 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AL360081.1-201ENST00000428299 555 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AL358472.1-201ENST00000431295 329 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RAB9AP5-201ENST00000437794 597 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 PTMAP6-201ENST00000439110 327 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RAB9AP2-201ENST00000443911 597 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 EXTL2P1-201ENST00000446218 416 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 NPM1P39-201ENST00000449818 867 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AP002371.1-201ENST00000463604 433 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RN7SL271P-201ENST00000487601 295 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 KCTD9P2-201ENST00000512203 1013 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 OR5D15P-201ENST00000531671 942 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AL121839.1-201ENST00000556233 1185 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 MIR4644-201ENST00000579929 84 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC090312.1-201ENST00000580637 348 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 MIR5684-201ENST00000585074 65 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 RPL12P25-202ENST00000598100 674 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 EIF1P6-201ENST00000600054 334 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.42□□□□□ -1.86
TMEM235A6NFC5 MIR7155-201ENST00000615925 56 ntBASIC3.42□□□□□ -1.86
TMEM235A6NFC5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms