Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 KRT19P6-201ENST00000510983 209 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 FTH1P21-201ENST00000512179 511 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC009268.1-201ENST00000561352 1203 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC064801.1-201ENST00000612025 407 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 BNIP3P41-202ENST00000616656 861 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.43□□□□□ -1.7
SMIM28A0A1B0GU29 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RNA5SP388-201ENST00000362584 119 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 Z95327.2-201ENST00000414579 1873 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 GNG5P5-201ENST00000420444 220 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AL358472.1-201ENST00000431295 329 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 KCTD10P1-201ENST00000434203 625 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 HMGB3P10-201ENST00000434734 572 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RPL12P18-201ENST00000437175 325 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RPS4XP4-201ENST00000443195 763 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC027281.1-201ENST00000574178 758 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 MIR5684-201ENST00000585074 65 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 MIR6875-201ENST00000617506 72 ntBASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMIM28A0A1B0GU29 OR10AB1P-202ENST00000641219 1686 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 RNU6-618P-201ENST00000363518 112 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 RNU6-1263P-201ENST00000384601 106 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 SNORA11-201ENST00000408789 128 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 OR8F1P-201ENST00000425243 930 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 MTCYBP21-201ENST00000443300 1113 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC002553.2-201ENST00000453217 340 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 RPL36AP13-201ENST00000457490 317 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 RPS27AP18-201ENST00000515536 459 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC104997.1-201ENST00000519761 717 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 RPL23AP87-202ENST00000573039 466 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 SNORD39.2-201ENST00000579995 76 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC093227.2-201ENST00000589357 285 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC022916.3-201ENST00000592961 742 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC114878.2-201ENST00000604863 1251 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms