Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 DPRXP5-201ENST00000604662 539 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AP003392.5-201ENST00000607857 415 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC126915.2-201ENST00000610957 190 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005332.6-201ENST00000613178 446 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC018445.2-201ENST00000622987 260 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079416.3-201ENST00000624479 549 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 MIR1322-201ENST00000638013 71 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 SAMMSON-227ENST00000642114 1199 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 AC109315.1-201ENST00000584143 1347 ntBASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL4A3BPQ9Y5P4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL078621.3-201ENST00000623707 2042 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU1-19P-201ENST00000363306 165 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RNA5SP241-201ENST00000391326 114 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 HSPA8P15-201ENST00000401676 786 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL23AP47-201ENST00000408017 460 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 FCF1P2-201ENST00000415284 583 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL136231.1-201ENST00000429407 730 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL7AP49-201ENST00000429522 581 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL591438.1-201ENST00000433508 581 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 EEF1B2P5-201ENST00000444820 548 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL21P134-201ENST00000453468 483 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 CBX1P2-201ENST00000453841 458 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093166.2-201ENST00000455969 1017 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC073358.1-201ENST00000505671 684 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC116353.3-201ENST00000511215 249 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SKP82-201ENST00000516786 223 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC022360.1-201ENST00000521058 340 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 MTND2P38-201ENST00000522536 667 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 OR10G5P-201ENST00000532733 358 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 HAUS8P1-201ENST00000549005 542 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL132657.2-201ENST00000564417 358 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SL290P-201ENST00000578661 300 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC069307.1-201ENST00000602820 447 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL022394.1-201ENST00000606979 292 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AP002505.2-201ENST00000623585 696 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 CYP4F35P-202ENST00000636121 390 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 MKKS-204ENST00000639674 192 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AC011493.1-201ENST00000596753 1632 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL4A3BPQ9Y5P4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms