Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC015795.1-201ENST00000513669 327 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC127024.5-201ENST00000580085 462 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011944.2-201ENST00000624440 683 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC008758.3-201ENST00000507003 1829 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AL512283.1-201ENST00000606756 1384 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 ZFRP1-201ENST00000457579 2970 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AP001002.1-201ENST00000625148 1513 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC007529.1-201ENST00000418574 2178 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 SNORA73.1-201ENST00000363107 205 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC00993-201ENST00000420453 540 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 BX119904.1-201ENST00000432026 348 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL935212.3-201ENST00000450729 284 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 RN7SL41P-201ENST00000476144 297 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC023050.1-201ENST00000498198 304 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 HAUS1P3-201ENST00000523909 662 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL109766.1-201ENST00000555080 552 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC084783.1-201ENST00000565846 910 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 MTND4LP24-201ENST00000572277 291 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 MIR5699-201ENST00000578903 90 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 MIR1254-2-201ENST00000579553 63 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC023575.1-201ENST00000580510 358 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC018695.5-201ENST00000605872 315 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 AC134882.1-201ENST00000603738 1676 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 SAGE2P-201ENST00000420011 2126 ntBASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA1Q9Y5H4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL442639.1-201ENST00000625030 1899 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC125257.1-201ENST00000560400 2930 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RNA5SP509-201ENST00000364577 119 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL21P67-201ENST00000402896 478 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL357515.1-201ENST00000402967 542 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RN7SKP263-201ENST00000411194 309 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC010385.1-201ENST00000412374 256 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 COX5BP7-201ENST00000414780 274 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RPEP3-201ENST00000425462 676 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL138785.1-201ENST00000425821 331 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 IPMKP1-201ENST00000425988 855 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 FTH1P16-201ENST00000435241 552 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RPS27P5-201ENST00000444247 244 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 HMGB3P21-201ENST00000452483 547 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC109327.1-201ENST00000471666 403 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC073358.1-201ENST00000505671 684 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC025674.1-201ENST00000507074 324 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC010468.3-201ENST00000508225 458 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC008628.1-201ENST00000508663 265 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 IGKV2-36-201ENST00000519999 223 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 CIR1P1-201ENST00000524055 1133 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AP003049.1-201ENST00000529418 457 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC025260.1-201ENST00000548858 430 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms