Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL121873.1-201ENST00000616013 524 ntBASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 AC016717.3-201ENST00000624730 554 ntBASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 AC006927.2-201ENST00000639256 389 ntBASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HDAC6Q9UBN7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 MFSD8-213ENST00000641134 1327 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 TLK1P1-201ENST00000456760 2440 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC008549.2-201ENST00000333482 706 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC104297.1-201ENST00000393779 870 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 RPL22P22-201ENST00000395439 379 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL592291.1-201ENST00000403830 352 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 HMGB1P13-201ENST00000406019 642 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 CHIAP3-201ENST00000423668 1133 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 RPEP3-201ENST00000425462 676 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 HSPE1P22-201ENST00000456856 327 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 IGBP1P5-201ENST00000507524 1000 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 SNORA31.13-201ENST00000516624 135 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 OR8X1P-201ENST00000534542 869 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 ATP5J2P6-201ENST00000565203 266 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC136624.4-201ENST00000573044 370 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 RNF138P2-201ENST00000603490 592 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL049844.2-201ENST00000604280 628 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AP002802.2-201ENST00000605877 235 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 OR7A19P-201ENST00000608051 733 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL135786.2-201ENST00000608422 615 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL050303.3-201ENST00000613704 284 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC084824.4-201ENST00000620106 731 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AL133268.1-201ENST00000405676 1401 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 AC009643.2-201ENST00000603543 1448 ntBASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HDAC6Q9UBN7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL034370.1-201ENST00000397254 1590 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MAPK10-286ENST00000641208 8747 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL606537.1-201ENST00000607258 2011 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC106754.1-201ENST00000562632 1513 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RN7SKP224-201ENST00000364140 325 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RNU1-82P-201ENST00000390851 165 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RNA5SP397-201ENST00000391323 118 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MTATP6P31-201ENST00000406985 692 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RNA5SP498-201ENST00000411342 120 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 ELOCP19-201ENST00000411919 318 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC114973.1-201ENST00000429057 632 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 RPS17P8-201ENST00000434525 335 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 MTND2P28-201ENST00000457540 1044 ntBASIC5.3□□□□□ -1.56
HDAC6Q9UBN7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms