Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC064801.1-201ENST00000612025 407 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC091046.2-201ENST00000620775 665 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC138907.10-201ENST00000623708 983 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC090017.1-201ENST00000548612 1779 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC092111.2-201ENST00000611627 1414 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC091046.3-201ENST00000631455 1574 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 RNU6-1257P-201ENST00000384625 110 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 RNU4-27P-201ENST00000410889 139 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC017078.1-201ENST00000416146 368 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AL606495.1-201ENST00000422100 813 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AL034379.1-201ENST00000423216 253 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 RPL23AP23-201ENST00000452590 471 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 RPL32P14-201ENST00000463196 378 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC006499.6-201ENST00000511169 607 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AP003355.1-201ENST00000518956 587 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC010476.1-201ENST00000519111 851 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 IFITM8P-201ENST00000522529 394 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AP001804.2-201ENST00000533932 910 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 MTND1P8-201ENST00000571424 950 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 MIR4715-201ENST00000584117 79 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC006272.2-201ENST00000594725 163 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AF230666.2-201ENST00000602328 725 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC068620.3-201ENST00000602749 560 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC093765.1-201ENST00000603758 881 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC112503.2-201ENST00000609005 552 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC010608.3-201ENST00000625048 527 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AP003485.1-201ENST00000625093 753 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 OR4G3P-201ENST00000633500 913 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX2Q9NPC8 AC012618.3-205ENST00000637896 1496 ntBASIC4.62□□□□□ -1.67
SIX2Q9NPC8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RAD1P1-201ENST00000231383 813 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RNU6-1000P-201ENST00000391066 106 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL024507.1-201ENST00000412741 274 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL158050.1-201ENST00000416077 457 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 MFSD13B-201ENST00000420133 1290 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 MTND4LP13-201ENST00000425022 298 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL645931.1-201ENST00000439737 410 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL138878.2-201ENST00000440581 1241 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RPS29P33-201ENST00000456717 146 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RN7SL98P-201ENST00000462271 300 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 RN7SL691P-201ENST00000494487 301 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 BNIP3P41-201ENST00000503774 571 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC021146.7-201ENST00000509604 775 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC034244.2-201ENST00000514668 858 ntBASIC4.61□□□□□ -1.67
SIX2Q9NPC8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.61□□□□□ -1.67
SIX2Q9NPC8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms