Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FRG2FP-204ENST00000453982 852 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 NF1P3-201ENST00000457709 450 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC021205.1-201ENST00000468797 348 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 SNRPCP3-201ENST00000474888 476 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 RN7SL70P-201ENST00000478322 302 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 GLUD1P3-202ENST00000508551 200 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 OR4D12P-201ENST00000509361 911 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AP003467.2-201ENST00000520175 319 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 GTF2IP11-201ENST00000526931 420 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 OR5AN2P-201ENST00000534535 896 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC107954.1-201ENST00000565906 727 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 MIR544B-201ENST00000582372 78 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 H3F3BP2-201ENST00000583907 357 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 BNIP3P23-201ENST00000599655 511 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC231657.1-201ENST00000624313 397 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 SNX18P12-201ENST00000624821 759 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC005618.4-201ENST00000625053 554 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC026634.1-201ENST00000634369 198 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 OR4G11P-202ENST00000642116 1414 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSU72Q9NP77 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 AC046144.1-201ENST00000478559 1853 ntBASIC6.05□□□□□ -1.44
SSU72Q9NP77 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.05□□□□□ -1.44
SSU72Q9NP77 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSU72Q9NP77 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC024587.1-201ENST00000505925 2157 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSU72Q9NP77 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSU72Q9NP77 RNU4-79P-201ENST00000362764 141 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 SNORA63-201ENST00000363450 132 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSU72Q9NP77 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 RNU6-908P-201ENST00000410160 94 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 PIGFP2-201ENST00000421400 651 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC002486.1-201ENST00000435098 391 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 OR52B5P-201ENST00000435337 951 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 RPS27AP15-201ENST00000447672 466 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 MTCO1P27-201ENST00000448269 226 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 C1DP4-201ENST00000455429 424 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 NIPA2P2-201ENST00000496376 1083 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 RPS26P24-201ENST00000497656 331 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 HMGN1P13-201ENST00000505795 138 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC006499.2-201ENST00000513470 337 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 RNA5SP418-201ENST00000515951 117 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 RN7SKP288-201ENST00000516227 268 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC078899.1-201ENST00000521432 1185 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AL121594.2-201ENST00000541658 472 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC008055.1-201ENST00000547032 609 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.04□□□□□ -1.44
SSU72Q9NP77 AL133338.2-201ENST00000604292 736 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 BCRP9-201ENST00000605312 388 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 BNIP3P10-201ENST00000605360 577 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 Y_RNA.812-201ENST00000610788 101 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 Y_RNA.784-201ENST00000613803 101 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 AC015712.7-201ENST00000615211 635 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 Y_RNA.787-201ENST00000616522 101 ntBASIC6.04□□□□□ -1.44
SSU72Q9NP77 Y_RNA.780-201ENST00000617336 101 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms