Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC022106.2-201ENST00000620114 757 ntBASIC5.18□□□□□ -1.58
USP29Q9HBJ7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
USP29Q9HBJ7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC007996.1-201ENST00000620414 2821 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RNU6-1214P-201ENST00000363650 109 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RNU6-185P-201ENST00000384421 107 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RNU6-549P-201ENST00000384433 107 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL035419.1-201ENST00000397037 564 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL034374.1-201ENST00000406329 351 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 SNORA77-201ENST00000408716 125 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 Y_RNA.625-201ENST00000411256 107 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 TAF13P2-201ENST00000416876 286 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 GTF2IP2-201ENST00000424290 697 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 USP9YP11-201ENST00000427537 717 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 HIGD1AP12-201ENST00000427832 281 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 YWHAEP5-201ENST00000431545 765 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RPS29P9-201ENST00000440360 171 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 GTF3AP5-201ENST00000442645 697 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 KNOP1P3-201ENST00000446933 426 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC092647.2-201ENST00000452998 253 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 USP9YP25-201ENST00000457708 443 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC097484.1-201ENST00000471148 389 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RPL23AP44-201ENST00000482216 473 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RN7SL591P-201ENST00000496150 292 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC091951.3-201ENST00000504093 246 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC010486.2-201ENST00000505572 483 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC034244.1-201ENST00000507687 207 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC004980.4-201ENST00000513375 203 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC012339.2-201ENST00000523996 453 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 BRD9P1-201ENST00000529855 560 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC027104.1-201ENST00000563702 681 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 ATP5F1P7-201ENST00000567330 760 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 MIR4675-201ENST00000577898 77 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 MIR3934-201ENST00000579806 107 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC080013.6-201ENST00000606185 215 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC100827.5-201ENST00000615883 426 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AC015871.5-202ENST00000623252 701 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 CCT8P1-201ENST00000413611 1657 ntBASIC5.17□□□□□ -1.58
USP29Q9HBJ7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
USP29Q9HBJ7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 MTND4P10-201ENST00000446199 1363 ntBASIC5.16□□□□□ -1.58
USP29Q9HBJ7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 OR5H2-201ENST00000355273 945 ntBASIC5.16□□□□□ -1.58
USP29Q9HBJ7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
USP29Q9HBJ7 AL008987.1-201ENST00000415528 237 ntBASIC5.16□□□□□ -1.58
USP29Q9HBJ7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.16□□□□□ -1.58
USP29Q9HBJ7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms