Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 SCARNA20.4-201ENST00000516969 131 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 OR1F2P-201ENST00000570470 933 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AP001542.2-201ENST00000593141 364 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC004067.1-201ENST00000608733 700 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC013476.2-201ENST00000614456 459 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC022140.2-201ENST00000623500 188 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC006600.2-201ENST00000624834 2506 ntBASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.01□□□□□ -1.45
BCAS3Q9H6U6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 METTL21EP-201ENST00000298105 713 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 RNU1-146P-201ENST00000364015 165 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 OR1L1-202ENST00000373686 1083 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 ATP5HP3-201ENST00000396994 486 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 U3.36-201ENST00000408418 213 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL133482.1-201ENST00000415988 498 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 FNDC3CP-201ENST00000420795 1155 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC007435.1-201ENST00000421086 415 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 EI24P4-201ENST00000423683 1078 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 ZNF863P-201ENST00000426746 417 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL596276.1-201ENST00000434465 418 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC122718.1-201ENST00000439448 744 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 FAM133DP-201ENST00000464802 691 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 NDUFB5P1-201ENST00000508134 564 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 PGBD4P4-201ENST00000509673 613 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC109445.1-201ENST00000512356 383 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 OR5AK3P-201ENST00000527486 1297 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 ZNF519P3-201ENST00000557158 1032 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC009962.1-201ENST00000567327 3813 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC005341.1-201ENST00000571086 708 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 EIF1P6-201ENST00000600054 334 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL356055.1-201ENST00000602528 446 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC108738.1-201ENST00000603703 237 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC091805.2-201ENST00000603848 235 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC019131.2-201ENST00000609071 870 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AL121612.2-201ENST00000612261 482 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 NAMPTP1-201ENST00000440465 2514 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC003985.2-201ENST00000562268 1669 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 AC093909.5-201ENST00000621839 1799 ntBASIC6□□□□□ -1.45
BCAS3Q9H6U6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
BCAS3Q9H6U6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6□□□□□ -1.45
BCAS3Q9H6U6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 CR848007.1-201ENST00000442354 1699 ntBASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 RNA5SP514-201ENST00000363717 111 ntBASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 RNU4-31P-201ENST00000384211 141 ntBASIC5.99□□□□□ -1.45
BCAS3Q9H6U6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms