Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPS29P19-201ENST00000479709 171 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 RNA5SP154-201ENST00000516193 111 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC090515.3-201ENST00000560431 315 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
UPF3BQ9BZI7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 CYP1D1P-201ENST00000416662 1433 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 SNORA62.3-201ENST00000365110 153 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 ATP5F1P2-201ENST00000398143 760 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RNA5SP44-201ENST00000410446 133 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 AC011998.1-201ENST00000433403 117 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RPS3AP54-201ENST00000435535 734 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RPL23AP89-201ENST00000439324 255 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 FHP1-201ENST00000442741 703 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 VN1R34P-201ENST00000447387 883 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RPL23AP81-201ENST00000455252 467 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 RN7SL691P-201ENST00000494487 301 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 BNIP3P41-201ENST00000503774 571 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 OR4A2P-201ENST00000527276 913 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 IPO5P1-202ENST00000600039 287 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 ARF4P1-201ENST00000605447 541 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 AC015813.4-201ENST00000610469 179 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 AC010809.3-201ENST00000621310 641 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 AL356489.2-201ENST00000566968 3528 ntBASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.01□□□□□ -1.61
UPF3BQ9BZI7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 RNU1-14P-201ENST00000362759 152 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 MIR670-201ENST00000390142 98 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 ATP5F1P3-201ENST00000397213 657 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 RPS12P5-201ENST00000423449 371 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AL512326.1-201ENST00000443050 721 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 RPL7P19-201ENST00000469948 618 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 RN7SL585P-201ENST00000470538 280 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC006517.1-201ENST00000480485 328 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 RN7SL810P-201ENST00000493031 276 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 RNA5SP49-201ENST00000516450 115 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC053481.3-201ENST00000577881 843 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AL158196.1-201ENST00000616786 434 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC006133.1-201ENST00000617106 264 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC131238.1-201ENST00000617135 328 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 MAPK10-253ENST00000641010 4072 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 MFSD8-242ENST00000641690 4199 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5□□□□□ -1.61
UPF3BQ9BZI7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UPF3BQ9BZI7 AC107021.2-201ENST00000567714 2095 ntBASIC5□□□□□ -1.61
UPF3BQ9BZI7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC087190.4-201ENST00000574616 8334 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 RHOT1P2-201ENST00000366423 333 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MIR93-201ENST00000385024 80 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 ST13P16-201ENST00000401760 781 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 MIR1179-201ENST00000408703 91 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AL160275.2-201ENST00000412010 394 ntBASIC4.99□□□□□ -1.61
UPF3BQ9BZI7 AC073136.2-201ENST00000417282 849 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms