Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 BMS1P3-201ENST00000372011 932 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 MIR659-201ENST00000384963 97 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 MIR1302-8-201ENST00000408342 128 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 RNU6-648P-201ENST00000410190 107 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 TRGV6-201ENST00000417928 299 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 VN1R42P-201ENST00000424651 344 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 NDUFA5P10-201ENST00000432147 357 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 UBE2D3P1-201ENST00000436669 444 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC016831.4-201ENST00000438302 307 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 H2AFZP5-201ENST00000446960 382 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 RPL23AP23-201ENST00000452590 471 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC098583.1-201ENST00000480875 255 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 PRELID3BP7-201ENST00000503606 469 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 PCNPP1-201ENST00000552501 511 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AP002884.5-201ENST00000595053 1132 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC090181.2-201ENST00000602975 672 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 COX6CP4-201ENST00000605798 228 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC087752.4-201ENST00000605911 462 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC025175.1-201ENST00000606482 759 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 AC008432.1-201ENST00000615912 1320 ntBASIC5.68□□□□□ -1.5
SALL3Q9BXA9 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SALL3Q9BXA9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC093536.2-201ENST00000565257 1406 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC105074.1-201ENST00000623380 3095 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC021146.4-201ENST00000309229 279 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 RNU5A-2P-201ENST00000384337 116 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 SNORD116-4-201ENST00000384733 96 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL138880.1-201ENST00000405824 642 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 UBE2V1P11-201ENST00000411559 285 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 SEPT2P1-201ENST00000419651 180 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL390023.1-201ENST00000428836 262 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 VDAC1P6-201ENST00000430062 855 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 GSTA7P-201ENST00000438425 448 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 MTND1P34-201ENST00000438556 671 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC245517.2-201ENST00000442890 346 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ISCUP1-201ENST00000454451 448 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 OR2A20P-203ENST00000498397 1268 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 HPRT1P1-201ENST00000509498 657 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 IGKV1-32-201ENST00000519290 311 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AP003717.3-201ENST00000544832 1180 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC005034.4-201ENST00000603612 899 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 OR51C1P-201ENST00000608504 942 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 MIR6820-201ENST00000611508 62 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 HULC.1-201ENST00000612720 240 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 AC008121.2-201ENST00000614647 523 ntBASIC5.67□□□□□ -1.5
SALL3Q9BXA9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL3Q9BXA9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL3Q9BXA9 AC245100.2-201ENST00000454544 1679 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms