Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS50Q96JG6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS50Q96JG6 AC120338.1-201ENST00000625074 1541 ntBASIC5.13□□□□□ -1.59
VPS50Q96JG6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC104118.1-201ENST00000607625 1589 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 RNA5SP183-201ENST00000362452 119 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 RNA5SP335-201ENST00000363817 110 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 SNORA70-201ENST00000384436 135 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 HSPA8P15-201ENST00000401676 786 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 SPTLC1P2-201ENST00000407089 121 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 MIR1303-201ENST00000408625 86 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL358176.3-201ENST00000420757 454 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC090018.1-201ENST00000434369 367 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC073143.1-201ENST00000436316 395 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL354710.1-201ENST00000453641 246 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 MTND2P14-201ENST00000482139 351 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 RPL15P21-201ENST00000495592 567 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 ARL4AP1-201ENST00000503220 705 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC118282.2-201ENST00000508739 374 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 RNA5SP464-201ENST00000516251 108 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 IGKV2D-10-201ENST00000520194 281 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC100784.1-201ENST00000522790 310 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC087373.1-201ENST00000524920 491 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC006349.1-201ENST00000555526 235 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC022884.3-201ENST00000579571 248 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL358072.1-201ENST00000604156 575 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AC005252.1-201ENST00000604518 1063 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL133507.1-201ENST00000605269 557 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS50Q96JG6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS50Q96JG6 AL137100.1-201ENST00000556703 1620 ntBASIC5.12□□□□□ -1.59
VPS50Q96JG6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RNA5SP507-201ENST00000363603 121 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 snoZ40.1-201ENST00000364540 72 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RNU6-413P-201ENST00000384115 107 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RNU6-575P-201ENST00000411326 105 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL390774.1-201ENST00000411924 246 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 MTND4P22-201ENST00000413116 1169 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC104333.2-201ENST00000422630 192 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC007161.1-204ENST00000423039 460 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 RPF2P1-201ENST00000424137 906 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL139148.1-201ENST00000427122 680 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS50Q96JG6 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS50Q96JG6 COX7BP2-201ENST00000437976 242 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 AL008629.1-201ENST00000438615 184 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 CEACAMP7-201ENST00000444105 496 ntBASIC5.11□□□□□ -1.59
VPS50Q96JG6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms