Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC010738.1-201ENST00000604970 987 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL022394.1-201ENST00000606979 292 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL512329.2-201ENST00000607350 548 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL139418.1-201ENST00000613613 177 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC138965.3-201ENST00000623875 498 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 CYP4F35P-202ENST00000636121 390 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 ATE1-AS1-202ENST00000636460 506 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AL360270.2-201ENST00000562952 5985 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 AP000526.1-201ENST00000603308 1388 ntBASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTHRC1Q96CG8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL590763.1-201ENST00000398297 1545 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC008549.2-201ENST00000333482 706 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RNA5SP90-201ENST00000364801 99 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR8V1P-201ENST00000395193 873 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AP000534.2-201ENST00000412729 568 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RPL35AP24-201ENST00000413846 330 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR52B5P-201ENST00000435337 951 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 CBX1P4-201ENST00000439415 457 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC093155.1-201ENST00000440164 826 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL591503.2-201ENST00000442314 1005 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL606662.1-201ENST00000445763 553 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 FAR2P1-206ENST00000449736 709 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR52E3P-201ENST00000452083 936 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RN7SL799P-201ENST00000475891 298 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RPL7P39-201ENST00000481157 744 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC008638.1-201ENST00000506035 866 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 MTCYBP16-201ENST00000509187 1129 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 TCP11X3P-202ENST00000514289 1254 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR5AZ1P-201ENST00000527448 943 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AL358913.1-201ENST00000554342 121 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC040958.1-201ENST00000561102 201 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR4K7P-201ENST00000580232 945 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RN7SL708P-201ENST00000580952 299 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC072039.2-201ENST00000608883 439 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC018926.3-201ENST00000618841 406 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 Z69908.1-201ENST00000622603 247 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AF246928.1-201ENST00000623768 87 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC098679.5-201ENST00000624394 571 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC116618.1-201ENST00000634617 774 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 FP325313.1-201ENST00000638228 703 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR52B5P-202ENST00000641118 1110 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 DCAF13P3-201ENST00000561147 1334 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AC087359.1-201ENST00000508335 1740 ntBASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTHRC1Q96CG8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTHRC1Q96CG8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms