Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RN7SL205P-201ENST00000490174 284 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC104164.2-201ENST00000496953 495 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RNU6-751P-201ENST00000516382 101 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC006064.5-201ENST00000541782 248 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC027176.2-201ENST00000559166 746 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 ELOCP28-201ENST00000590044 317 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 FAM60CP-201ENST00000591086 664 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC234771.5-201ENST00000600161 514 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC068790.5-201ENST00000602741 355 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC064801.1-201ENST00000612025 407 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RN7SL722P-201ENST00000617780 284 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RN7SL565P-201ENST00000618246 284 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 MAPK10-253ENST00000641010 4072 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 IQCB2P-201ENST00000401788 1633 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 AL137100.1-201ENST00000556703 1620 ntBASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTN4IP1Q8WWV3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC008033.1-201ENST00000216407 1162 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC011155.1-201ENST00000316512 456 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 MIR365B-201ENST00000362317 111 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 MIR585-201ENST00000384887 94 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AP000357.1-201ENST00000409926 1165 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CNOT7P1-201ENST00000429006 852 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CEACAMP1-201ENST00000434624 1035 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CASP3P1-201ENST00000446037 609 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 IGLVIV-65-201ENST00000517313 360 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC090819.1-201ENST00000523800 1111 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 OR5BC1P-201ENST00000529327 739 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC026368.1-201ENST00000614934 690 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AL021997.2-201ENST00000615674 271 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 uc_338.13-201ENST00000618243 179 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 AC025031.4-201ENST00000621248 3271 ntBASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.54□□□□□ -1.84
RTN4IP1Q8WWV3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RNA5SP502-201ENST00000362694 119 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RNU6-697P-201ENST00000363348 107 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RNA5SP175-201ENST00000364275 119 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RNU6-891P-201ENST00000384280 111 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AC097374.1-203ENST00000400783 485 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 MIR1179-201ENST00000408703 91 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 SNORA3C-201ENST00000408792 125 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RPL37P18-201ENST00000411602 243 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RAC1P3-201ENST00000416129 580 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 AL139095.3-201ENST00000419672 1203 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 HMGB1P32-201ENST00000425971 565 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 RPS26P47-201ENST00000427219 348 ntBASIC3.53□□□□□ -1.84
RTN4IP1Q8WWV3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms