Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 RN7SKP182-201ENST00000410772 298 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC107016.1-201ENST00000550463 337 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC012417.1-201ENST00000582307 1039 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC090246.1-201ENST00000616499 426 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 AC099669.2-201ENST00000616549 437 ntBASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.25□□□□□ -1.73
SHROOM3Q8TF72 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 MARK2P15-201ENST00000432204 2186 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC026427.2-201ENST00000506228 536 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 SETP1-201ENST00000556014 845 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC107982.3-201ENST00000584957 985 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC015908.5-201ENST00000623289 343 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 AC106871.1-201ENST00000568324 3102 ntBASIC4.24□□□□□ -1.73
SHROOM3Q8TF72 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MIR7-3-201ENST00000384898 110 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 VDAC2P1-201ENST00000399358 958 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RPS24P12-201ENST00000402084 394 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 HMGB3P19-201ENST00000403971 560 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 GNG5P5-201ENST00000420444 220 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC087650.1-201ENST00000431445 468 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MAPRE1P3-201ENST00000435438 796 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 TMX2P1-201ENST00000436507 708 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RPS11P1-201ENST00000451072 473 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RPL31P61-201ENST00000496160 376 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AL592156.1-201ENST00000508758 304 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 DUXAP2-201ENST00000519198 589 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC053481.4-201ENST00000583164 216 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 OR51C1P-202ENST00000641159 1444 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RHOT1P2-201ENST00000366423 333 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MIR483-201ENST00000385070 76 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC022795.1-201ENST00000473808 480 ntBASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM3Q8TF72 SRGNP1-201ENST00000603392 451 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms