Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 AC009779.8-201ENST00000641684 4384 ntBASIC6.32□□□□□ -1.4
SHKBP1Q8TBC3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RNA5SP88-201ENST00000365560 109 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL360271.1-201ENST00000395679 510 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RNU4-55P-201ENST00000410731 137 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AMD1P2-201ENST00000412936 992 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 FCF1P2-201ENST00000415284 583 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC023141.9-201ENST00000458734 412 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RN7SL717P-201ENST00000478343 297 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RN7SL214P-201ENST00000487317 265 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC114728.1-201ENST00000488289 483 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RPL39P36-201ENST00000490784 156 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 KLRA1P-201ENST00000503499 986 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC087276.1-201ENST00000529659 480 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC087283.1-201ENST00000604029 1074 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC007363.1-201ENST00000604736 620 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RNA5SP440-201ENST00000612665 119 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RN7SL787P-201ENST00000613000 284 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL031658.2-201ENST00000616850 651 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AC089998.1-201ENST00000548575 3141 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 AL033543.1-201ENST00000623440 13454 ntBASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SHKBP1Q8TBC3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AL022323.4-201ENST00000623980 13120 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 WDR95P-201ENST00000425638 1542 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 OR13C1P-202ENST00000641378 2919 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 SNORA51.2-201ENST00000364595 132 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 RNU5E-5P-201ENST00000365379 116 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 RNU6-483P-201ENST00000384088 108 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms