Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL353796.1-201ENST00000561542 3241 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AL137100.1-201ENST00000556703 1620 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC138393.1-206ENST00000540997 1886 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AL079342.2-201ENST00000403367 482 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RPSAP35-201ENST00000413753 818 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC090960.1-201ENST00000421072 306 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 CRIP1P1-201ENST00000427567 185 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RPS27AP12-201ENST00000429552 465 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC234064.1-201ENST00000436312 247 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 ARAFP2-201ENST00000440565 559 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RSL24D1P3-201ENST00000449255 495 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC104978.1-201ENST00000449387 391 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RNU7-27P-201ENST00000459281 62 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC020890.1-201ENST00000491837 504 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC020593.1-201ENST00000507399 299 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AP000889.1-201ENST00000530968 660 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 MIR5708-201ENST00000579723 85 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RN7SL356P-201ENST00000582228 248 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC090525.3-201ENST00000605601 189 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 VIS1.1-201ENST00000610517 203 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 OR8B1P-202ENST00000641132 1178 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC108751.5-201ENST00000492880 1336 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC000367.1-201ENST00000452711 1766 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 MTCO1P6-201ENST00000481192 1384 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 AC109446.4-201ENST00000623235 2755 ntBASIC6.18□□□□□ -1.42
SMC1BQ8NDV3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC026523.2-201ENST00000625039 7739 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 SNORA40.2-201ENST00000390847 128 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 RNA5SP171-201ENST00000391071 115 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AL445189.1-201ENST00000405722 338 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 TRGV6-201ENST00000417928 299 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 RPL12P34-201ENST00000424532 479 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 OR5AW1P-201ENST00000426334 1006 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 RPL23AP1-201ENST00000428990 471 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AL365396.1-201ENST00000430854 671 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 KRT8P51-201ENST00000438938 274 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 ANKRD26P4-201ENST00000455755 950 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 RPL12P20-201ENST00000475538 479 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC023424.1-201ENST00000496058 459 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC021193.1-201ENST00000511607 420 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AP003461.1-201ENST00000528866 78 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 NPM1P42-201ENST00000560329 862 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AC099676.1-201ENST00000608886 657 ntBASIC6.17□□□□□ -1.42
SMC1BQ8NDV3 AL360219.1-201ENST00000610230 366 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms