Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC023813.2-201ENST00000564321 469 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC010620.1-201ENST00000601088 1102 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AL022161.1-201ENST00000604390 213 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC007349.4-201ENST00000608114 532 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC010435.1-201ENST00000623353 1177 ntBASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLIP4Q8N3C7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CLIP4Q8N3C7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLIP4Q8N3C7 AC107068.1-201ENST00000563286 4218 ntBASIC4.59□□□□□ -1.68
CLIP4Q8N3C7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MTND4P10-201ENST00000446199 1363 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 OR5H2-201ENST00000355273 945 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 SNORA73.1-201ENST00000363107 205 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RNU4-92P-201ENST00000363783 136 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP27-201ENST00000363839 119 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RNU4-51P-201ENST00000364206 140 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RNU6-244P-201ENST00000391028 104 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 DNAJC19P6-201ENST00000401853 280 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 FCF1P5-201ENST00000406490 482 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RPS7P9-201ENST00000414704 586 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AL008987.1-201ENST00000415528 237 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC079355.1-201ENST00000421770 223 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 NANOGP2-201ENST00000435391 727 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC097499.1-201ENST00000444277 208 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 CASP3P1-201ENST00000446037 609 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AL354714.3-201ENST00000447284 493 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RSL24D1P3-201ENST00000449255 495 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC016724.1-201ENST00000453215 421 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 USP9YP25-201ENST00000457708 443 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 CYCSP34-201ENST00000458172 304 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RN7SL172P-201ENST00000460535 303 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RN7SL515P-201ENST00000463999 297 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 COPS8P2-201ENST00000473228 627 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 NIP7P2-201ENST00000485801 544 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 HMGN2P25-201ENST00000486956 268 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 SNRPCP2-201ENST00000504370 475 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC034244.1-201ENST00000507687 207 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC125612.1-201ENST00000547580 377 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 Z99497.2-201ENST00000603634 310 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MTND3P19-201ENST00000603825 345 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AC104687.2-201ENST00000604442 342 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 MIR3974-201ENST00000637126 96 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 PABPC1P6-201ENST00000445594 1829 ntBASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLIP4Q8N3C7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 ZNF733P-202ENST00000444809 1573 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 AC108751.5-201ENST00000492880 1336 ntBASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CLIP4Q8N3C7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms