Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 SNORA74C-1-201ENST00000580726 201 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 MIR3939-201ENST00000582614 106 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC015849.2-201ENST00000605738 409 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AP002802.2-201ENST00000605877 235 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 RMST_5.1-201ENST00000618704 126 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC009120.7-201ENST00000623452 780 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC006927.2-201ENST00000639256 389 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 OR56B2P-202ENST00000641377 2453 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SYNE4Q8N205 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.94□□□□□ -1.46
SYNE4Q8N205 AC007382.1-201ENST00000624376 2618 ntBASIC5.94□□□□□ -1.46
SYNE4Q8N205 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC099786.3-201ENST00000565735 1410 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 RNU6-207P-201ENST00000384137 107 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 RNU4-22P-201ENST00000411058 166 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 RPL21P108-201ENST00000413857 481 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AL445183.3-201ENST00000414168 502 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC140479.3-201ENST00000418944 1126 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 USP9YP10-201ENST00000454868 628 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC034236.1-201ENST00000469891 373 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC109327.1-201ENST00000471666 403 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 SETP6-201ENST00000479329 568 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 NIP7P2-201ENST00000485801 544 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 USP9YP5-201ENST00000511770 630 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC005868.1-201ENST00000536421 331 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC027807.1-201ENST00000559921 996 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC090888.1-201ENST00000561335 1141 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC007599.1-201ENST00000568688 1174 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AL158042.1-201ENST00000605338 460 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC025175.1-201ENST00000606482 759 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 VN1R9P-201ENST00000614184 867 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC093875.1-201ENST00000623688 504 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 AC011944.2-201ENST00000624440 683 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.93□□□□□ -1.46
SYNE4Q8N205 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SYNE4Q8N205 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SYNE4Q8N205 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 RNU1-85P-201ENST00000364127 164 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC234772.1-201ENST00000377927 937 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL359837.1-201ENST00000381357 287 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 BTF3L4P1-201ENST00000413813 468 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 GLUD1P9-201ENST00000420997 1173 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 VN1R42P-201ENST00000424651 344 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 FTH1P16-201ENST00000435241 552 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 CBX1P1-201ENST00000440184 427 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AL627224.1-201ENST00000448334 444 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 RPL7P55-201ENST00000450522 746 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC073387.1-201ENST00000453261 709 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.92□□□□□ -1.46
SYNE4Q8N205 RN7SL517P-201ENST00000462240 305 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC126121.1-201ENST00000482313 553 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AF213884.2-201ENST00000510417 903 ntBASIC5.92□□□□□ -1.46
SYNE4Q8N205 AC010625.1-201ENST00000511296 403 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms