Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC135001.1-201ENST00000544546 283 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC022387.2-201ENST00000604050 448 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC013244.1-201ENST00000604279 193 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC007546.1-201ENST00000619452 559 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC018445.2-201ENST00000622987 260 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
NUDCD3Q8IVD9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 RNU6-152P-201ENST00000384037 107 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 MIR298-201ENST00000401212 88 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AP000357.1-201ENST00000409926 1165 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 RN7SKP106-201ENST00000410832 272 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 RPA2P2-201ENST00000419698 796 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AL356806.1-201ENST00000422524 916 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AL606490.8-201ENST00000441624 319 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC022784.5-201ENST00000522241 437 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC084757.1-201ENST00000559987 490 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 UBE2FP2-201ENST00000566646 462 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 MIR4737-201ENST00000583979 81 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC090510.2-201ENST00000617465 629 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AC068870.2-201ENST00000620635 389 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 AL356489.2-201ENST00000566968 3528 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 CASC19-284ENST00000642142 1868 ntBASIC4.22□□□□□ -1.73
NUDCD3Q8IVD9 NOL8P1-201ENST00000508336 3529 ntBASIC4.21□□□□□ -1.73
NUDCD3Q8IVD9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 RNU1-130P-201ENST00000363930 160 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 SNORA37-201ENST00000384504 129 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 MIR7-1-201ENST00000384871 110 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 SNORA3C-201ENST00000408792 125 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AL139095.3-201ENST00000419672 1203 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 RPS6P12-201ENST00000432491 726 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 NDUFA5P1-201ENST00000433858 341 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 LYPLA1P1-201ENST00000434514 622 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC092013.1-201ENST00000438795 332 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 PTMAP6-201ENST00000439110 327 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 RAD23BP3-201ENST00000454157 1152 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 PRELID3BP7-201ENST00000503606 469 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 BNIP3P41-201ENST00000503774 571 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 OR4V1P-201ENST00000525394 1140 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AP001160.4-201ENST00000596971 382 ntBASIC4.21□□□□□ -1.74
NUDCD3Q8IVD9 AC005021.1-201ENST00000608730 355 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms