Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 RPS12P5-201ENST00000423449 371 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 RPS27P18-201ENST00000431701 247 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 PSMD10P3-201ENST00000437000 448 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 MRPL48P1-201ENST00000445390 636 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC010374.1-201ENST00000503762 1237 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AP003717.3-201ENST00000544832 1180 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC074029.1-201ENST00000552531 1044 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC005084.1-201ENST00000605160 304 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL139022.2-201ENST00000606934 443 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC024933.1-201ENST00000608472 348 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC132825.7-201ENST00000638744 335 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 AC000374.1-201ENST00000434698 1745 ntBASIC4.55□□□□□ -1.68
NUP54Q7Z3B4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RN7SKP104-201ENST00000362605 328 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RNU6-468P-201ENST00000384003 109 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 SNORA51.8-201ENST00000384234 132 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RNU6-1257P-201ENST00000384625 110 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL109941.1-201ENST00000401925 229 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RN7SKP125-201ENST00000410481 302 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC007394.1-201ENST00000421941 531 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC073310.1-201ENST00000423226 1033 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC008065.1-201ENST00000428525 348 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RPL7P11-201ENST00000437586 658 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RNF2P1-201ENST00000442955 1010 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL356981.1-201ENST00000454879 684 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 RPL7P16-201ENST00000479738 738 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC093270.2-201ENST00000486157 792 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 GAPDHP56-201ENST00000506031 988 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 HMGB1P19-201ENST00000517578 577 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC126365.2-201ENST00000580630 379 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AP001180.3-201ENST00000582221 145 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC007448.1-201ENST00000582714 234 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC068620.3-201ENST00000602749 560 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC104687.2-201ENST00000604442 342 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC022306.3-201ENST00000619930 550 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC099654.2-201ENST00000433031 1980 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NUP54Q7Z3B4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 ERCC6-202ENST00000374127 1782 ntBASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.53□□□□□ -1.68
NUP54Q7Z3B4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms