Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC234782.4-201ENST00000417646 1048 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL158073.1-201ENST00000426848 1104 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RPL12P46-201ENST00000436610 195 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL445433.1-201ENST00000457507 257 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC006967.1-201ENST00000467608 589 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 MTND6P6-201ENST00000478031 263 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 HMGB1P19-201ENST00000517578 577 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 MTND5P21-201ENST00000531961 522 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC010735.1-201ENST00000567305 1026 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RN7SL802P-201ENST00000577858 299 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RN7SL690P-201ENST00000582087 240 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RNF138P2-201ENST00000603490 592 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL353600.1-201ENST00000608148 251 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC023509.5-201ENST00000617434 807 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL022401.1-201ENST00000619498 108 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL590396.2-201ENST00000636511 1041 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 OR2L1P-202ENST00000641567 1023 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AL034370.1-201ENST00000397254 1590 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC046144.1-201ENST00000478559 1853 ntBASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
SNX30Q5VWJ9 AC073055.1-201ENST00000456901 1621 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 MTND4P9-201ENST00000507819 1346 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC090971.4-201ENST00000560291 1800 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 RNU6-207P-201ENST00000384137 107 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 RNU6-1257P-201ENST00000384625 110 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL355143.1-201ENST00000407101 841 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 RSU1P3-201ENST00000412878 835 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 LINC00993-201ENST00000420453 540 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC245028.1-201ENST00000423259 256 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 DYNLL1P7-201ENST00000429273 258 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CDY14P-201ENST00000431260 1014 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 ACTR3P2-201ENST00000439585 1257 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL645931.1-201ENST00000439737 410 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CDY12P-201ENST00000440679 1015 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC011753.3-201ENST00000443436 406 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 H2AFZP6-201ENST00000444403 394 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CDY13P-201ENST00000445813 1015 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CDY23P-201ENST00000451661 1014 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CYCSP34-201ENST00000458172 304 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 CCDC75P1-201ENST00000469247 791 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC104971.1-201ENST00000495117 578 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC008562.1-201ENST00000521763 330 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL049839.1-201ENST00000556151 657 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 MIR5699-201ENST00000578903 90 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC234771.5-201ENST00000600161 514 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC087283.1-201ENST00000604029 1074 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 SNORD91B-202ENST00000608459 222 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 FAM27B-201ENST00000610601 213 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 AC006927.2-201ENST00000639256 389 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 LINC01355-201ENST00000566551 5444 ntBASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX30Q5VWJ9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms