Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC005345.1-201ENST00000431868 217 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 YWHAZP8-201ENST00000436935 731 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 MTND5P2-201ENST00000442927 1142 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 RN7SL188P-201ENST00000469842 285 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 RN7SL170P-201ENST00000487098 295 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SETP14-201ENST00000497538 873 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 DUTP7-201ENST00000507982 486 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC010486.3-201ENST00000511602 785 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SNORA70.20-201ENST00000516848 126 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC074051.3-201ENST00000570238 358 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC013444.2-201ENST00000603317 787 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 VIS1.1-201ENST00000610517 203 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AL603755.1-201ENST00000619504 163 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 AC103706.2-201ENST00000638080 240 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 CDR1-202ENST00000625883 1485 ntBASIC5.18□□□□□ -1.58
RNF220Q5VTB9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RNF220Q5VTB9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MTND5P31-201ENST00000419366 1374 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 OR56B2P-201ENST00000317102 954 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 GAPDHP24-201ENST00000328713 983 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 Y_RNA.25-201ENST00000362528 102 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RNA5SP433-201ENST00000364491 114 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 DSTNP4-201ENST00000399472 474 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RNU4-72P-201ENST00000410754 173 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC234781.2-201ENST00000426370 994 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RPL31P54-201ENST00000429803 370 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 CCDC75P1-201ENST00000469247 791 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 BET1P1-201ENST00000482276 359 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 LINC00888-204ENST00000487386 421 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 IGBP1P4-201ENST00000503202 879 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 KLRA1P-201ENST00000503499 986 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC091912.1-201ENST00000511351 248 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RNA5SP473-201ENST00000516402 125 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 Y_RNA.688-201ENST00000516565 95 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MTCO1P47-201ENST00000523889 1271 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 TRIM77BP-201ENST00000524985 1119 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC074029.1-201ENST00000552531 1044 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC107958.1-201ENST00000556576 290 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 DPPA2P4-201ENST00000563717 878 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MIR4716-201ENST00000579628 84 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MIR4271-201ENST00000582451 67 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 H3F3BP2-201ENST00000583907 357 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MIR4999-201ENST00000585029 91 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 MIR6780B-201ENST00000610307 79 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AL359535.1-201ENST00000612100 1087 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RN7SL544P-201ENST00000617232 284 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms