Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC083843.2-201ENST00000568248 6253 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 EOGT-210ENST00000615922 1931 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL672167.1-203ENST00000641299 2975 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNU4-44P-201ENST00000363050 141 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNU6-609P-201ENST00000365459 107 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RPS27AP11-201ENST00000402798 447 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNA5SP317-201ENST00000410176 116 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNA5SP311-201ENST00000411290 116 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SEPT7P8-201ENST00000413308 775 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 EIF1P3-201ENST00000423841 334 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 ZNF965P-201ENST00000432501 817 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 XKRY2-201ENST00000442362 1093 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNA5SP246-201ENST00000458909 119 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RPL35AP15-201ENST00000468042 339 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC078857.1-201ENST00000469870 667 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNA5SP315-201ENST00000516340 116 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 RNA5SP312-201ENST00000517068 116 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 OR4V1P-201ENST00000525394 1140 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC113192.3-201ENST00000529152 742 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC007224.1-201ENST00000564410 144 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC079148.1-201ENST00000565944 819 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC090330.1-201ENST00000588646 764 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL591034.3-201ENST00000605511 685 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL353726.1-201ENST00000614041 1000 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AL049777.1-201ENST00000622740 518 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 AC079298.2-201ENST00000623885 459 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.22□□□□□ -1.57
PDS5AQ29RF7 OR10AB1P-202ENST00000641219 1686 ntBASIC5.22□□□□□ -1.57
PDS5AQ29RF7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PDS5AQ29RF7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDS5AQ29RF7 MTND4P9-201ENST00000507819 1346 ntBASIC5.21□□□□□ -1.57
PDS5AQ29RF7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AL121657.1-201ENST00000327215 531 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 SNORD115-48-201ENST00000364764 76 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RNU1-13P-201ENST00000384499 162 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RN7SKP33-201ENST00000410942 340 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RN7SKP167-201ENST00000411047 285 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RAB9AP4-201ENST00000415230 609 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 EIF2S2P5-201ENST00000457635 968 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 CABYRP1-201ENST00000465493 1045 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AC022336.1-201ENST00000475510 337 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 DEFB109F-201ENST00000491870 277 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 RN7SL600P-201ENST00000581811 299 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 ABI1P1-201ENST00000603375 1120 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 AC090506.2-201ENST00000624521 419 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.21□□□□□ -1.58
PDS5AQ29RF7 HSPA8P19-201ENST00000505359 1517 ntBASIC5.21□□□□□ -1.58
PDS5AQ29RF7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms