Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.72□□□□□ -1.81
USF2Q15853 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 AC006116.3-201ENST00000592968 361 ntBASIC3.72□□□□□ -1.81
USF2Q15853 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 AC103710.3-201ENST00000608157 948 ntBASIC3.72□□□□□ -1.81
USF2Q15853 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.72□□□□□ -1.81
USF2Q15853 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.72□□□□□ -1.81
USF2Q15853 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 AC099654.2-201ENST00000433031 1980 ntBASIC3.72□□□□□ -1.81
USF2Q15853 AC123912.3-201ENST00000600907 1367 ntBASIC3.72□□□□□ -1.81
USF2Q15853 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF2Q15853 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.72□□□□□ -1.81
USF2Q15853 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.71□□□□□ -1.81
USF2Q15853 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
USF2Q15853 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
USF2Q15853 C4BPAP1-201ENST00000415474 1893 ntBASIC3.71□□□□□ -1.82
USF2Q15853 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
USF2Q15853 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.71□□□□□ -1.82
USF2Q15853 AF127577.6-201ENST00000623352 2191 ntBASIC3.71□□□□□ -1.82
USF2Q15853 IGKV7-3-201ENST00000357453 298 ntBASIC3.71□□□□□ -1.82
USF2Q15853 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USF2Q15853 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USF2Q15853 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 RN7SKP273-201ENST00000411392 314 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 GTF2IP5-201ENST00000414608 731 ntBASIC3.71□□□□□ -1.82
USF2Q15853 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF2Q15853 RPS17P8-201ENST00000434525 335 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AL451139.1-201ENST00000434718 346 ntBASIC3.71□□□□□ -1.82
USF2Q15853 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.71□□□□□ -1.82
USF2Q15853 PPIAP17-201ENST00000438507 471 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF2Q15853 TXNP2-201ENST00000443918 295 ntBASIC3.71□□□□□ -1.82
USF2Q15853 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 SEPT14P1-201ENST00000458703 648 ntBASIC3.71□□□□□ -1.82
USF2Q15853 TMED11P-201ENST00000479478 690 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC012158.1-204ENST00000483430 465 ntBASIC3.71□□□□□ -1.82
USF2Q15853 RPL5P23-201ENST00000496040 868 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 TRAV31-201ENST00000502780 342 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC117525.1-201ENST00000515228 503 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.71□□□□□ -1.82
USF2Q15853 AC093249.4-201ENST00000564755 259 ntBASIC3.71□□□□□ -1.82
USF2Q15853 MTND4LP24-201ENST00000572277 291 ntBASIC3.71□□□□□ -1.82
USF2Q15853 MIR3691-201ENST00000578066 90 ntBASIC3.71□□□□□ -1.82
USF2Q15853 MIR4443-201ENST00000585052 53 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.71□□□□□ -1.82
USF2Q15853 AC015911.5-201ENST00000587076 451 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC009303.3-201ENST00000591103 736 ntBASIC3.71□□□□□ -1.82
USF2Q15853 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.71□□□□□ -1.82
USF2Q15853 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF2Q15853 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USF2Q15853 AC006042.3-201ENST00000454684 1469 ntBASIC3.71□□□□□ -1.82
USF2Q15853 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USF2Q15853 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USF2Q15853 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.7□□□□□ -1.82
USF2Q15853 AP001002.1-201ENST00000625148 1513 ntBASIC3.7□□□□□ -1.82
USF2Q15853 AC092162.3-201ENST00000624511 1624 ntBASIC3.7□□□□□ -1.82
USF2Q15853 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
USF2Q15853 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF2Q15853 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USF2Q15853 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
USF2Q15853 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USF2Q15853 RNA5SP391-201ENST00000363456 119 ntBASIC3.7□□□□□ -1.82
USF2Q15853 U8.4-201ENST00000363626 134 ntBASIC3.7□□□□□ -1.82
USF2Q15853 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF2Q15853 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.7□□□□□ -1.82
USF2Q15853 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
USF2Q15853 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USF2Q15853 RNU6-185P-201ENST00000384421 107 ntBASIC3.7□□□□□ -1.82
USF2Q15853 AL138878.1-201ENST00000405131 347 ntBASIC3.7□□□□□ -1.82
USF2Q15853 AP002530.1-201ENST00000405705 684 ntBASIC3.7□□□□□ -1.82
USF2Q15853 SPTLC1P2-201ENST00000407089 121 ntBASIC3.7□□□□□ -1.82
USF2Q15853 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.7□□□□□ -1.82
USF2Q15853 RN7SKP278-201ENST00000410504 342 ntBASIC3.7□□□□□ -1.82
USF2Q15853 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.7□□□□□ -1.82
USF2Q15853 AC105402.1-201ENST00000413336 545 ntBASIC3.7□□□□□ -1.82
USF2Q15853 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.7□□□□□ -1.82
USF2Q15853 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USF2Q15853 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.7□□□□□ -1.82
USF2Q15853 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.7□□□□□ -1.82
USF2Q15853 AC008065.1-201ENST00000428525 348 ntBASIC3.7□□□□□ -1.82
USF2Q15853 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.7□□□□□ -1.82
USF2Q15853 RPL7P11-201ENST00000437586 658 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms